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Table 2 Sequencing data statistics

From: Time-resolved transcriptional profiling of Trichinella-infected murine myocytes helps to elucidate host–pathogen interactions in the muscle stage

Samples Clean readsa Clean basesb GC contentc (%) % ≥ Q30d
d-0-1 29,306,627 8,723,905,770 49.41 93.33
d-0-2 29,701,695 8,856,713,318 49.12 93.23
d-0-3 24,573,915 7,325,026,546 49.13 93.51
d-1-1 42,774,938 12,743,577,440 49.50 95.06
d-1-2 47,356,896 14,119,786,038 49.09 94.64
d-1-3 47,632,923 14,229,261,830 49.12 94.83
d-3-1 41,692,065 12,459,755,692 49.22 94.96
d-3-2 44,962,040 13,435,712,256 49.19 95.19
d-3-3 41,808,804 12,496,583,212 49.03 95.04
d-7-1 52,403,887 15,659,838,448 48.70 94.91
d-7-2 44,892,431 13,419,760,674 49.43 94.82
d-7-3 43,566,080 13,011,606,674 48.79 94.77
d-10-1 46,072,970 13,783,739,164 49.41 94.85
d-10-2 53,341,148 15,929,948,426 49.46 94.83
d-10-3 50,069,261 14,950,813,380 49.36 94.67
d-15-1 47,120,191 14,081,050,788 49.71 94.60
d-15-2 41,755,099 12,464,431,734 48.94 94.73
d-15-3 42,645,130 12,738,561,562 49.23 94.92
  1. aPaired-end reads of clean data
  2. bTotal number of bases of clean data
  3. cGC content percentage of clean data, i.e. percentage of clean data for bases G and C
  4. dPercentage of bases with a Q-score of ≥ 30