From: A PCR-RFLP method for genotyping of inversion 2Rc in Anopheles coluzzii
Tag position (breakpoints) | Concord | Ref/Alt | RE | Chr cut | Primer Pairs (5′➝3′) | Amplicon (bp) | Cleavage products (bp) |
---|---|---|---|---|---|---|---|
(2R:2675000) | |||||||
 2R:27283425 | 89.5% | G/A | Cac8I | 2R+c | F: TAATCGTGTTCGTTCGGTCA R: CCGGGTACACCTGGAAAGTA | 239 | 125, 114 |
 2R:28121178 | 87.2% | C/T | BstUI | 2R +c | F: AAATGCGTGTTGCACTTGAC R: CCAATAAATCCTAACCCACACG | 224 | 173, 51 |
 2R:30386671a | 86.9% | G/A | HaeII | 2R +c | F: GGAAAGTTCACGAGCCAAAA R: TGAGCTTTAGCGACTGCAAG | 270 | 165, 105 |
 2R:30392408b | 94.1% | A/G | HinfI | 2Rc | F: AGCTGCCAGGATTTTGTACG R: CGGCGGGGAAAGTAATTTAT | 233 | 136, 97 |
(2R:31473100) |