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Table 2 Concordance between the reference 2Rc inversion genotype and PCR-RFLP assay genotypes in the Burkina Faso sample

From: A PCR-RFLP method for genotyping of inversion 2Rc in Anopheles coluzzii

REF

AGG

Cac8I

BstUI

HaeII

HinfI

 

0

1

2

0

1

2

0

1

2

0

1

2

0

1

2

0

143

0

0

145

3

0

116

28

4

130

16

2

144

3

1

1

0

214

0

4

218

7

17

189

23

15

199

15

16

211

2

2

0

0

80

0

2

84

0

19

67

0

5

81

1

12

73

Concord (%)

437/437 (100%)

447/463 (96.5%)

372/463 (80.3%)

410/463 (88.6%)

428/463 (92.4%)

  1. Italic values are those concordant between cytogenetics and the assay
  2. REF, reference genotype (0, standard homozygote; 1, heterozygote; 2, inverted homozygote); AGG, aggregate PCR-RFLP genotype (see text); concord (%): concordance between reference and assay 2Rc genotypes