Table 2 Molecular diversity indexes of tetra- and octonucleated cyst-producing Entamoeba based on SSU rDNA locus (542 bp, n = 89)
Species (N) | Region (N) | Statistics | |||||
|---|---|---|---|---|---|---|---|
H ± SD | No. of haplotypes | No. of polymorphic sites | No. of substitutions | No. of transitions | No. of transversions | ||
E. coli (38) | All ST1 (16) | 0.816 ± 0.095 | 9 | 45 | 44 | 27 | 17 |
Brazil (12) | 0.772 ± 0.127 | 7 | 44 | 44 | 27 | 17 | |
BAG + SIRN (5) | 0.700 ± 0.218 | 3 | 5 | 5 | 3 | 2 | |
TER (2) | 1.0000 ± 0.5000 | 2 | 1 | 1 | 1 | 0 | |
SJPI (3) | 0.6667 ± 0.3143 | 2 | 4 | 4 | 2 | 2 | |
CAM (2) | 1.000 ± 0.500 | 2 | 7 | 7 | 3 | 4 | |
All ST2 (22) | 0.952 ± 0.029 | 15 | 52 | 57 | 26 | 31 | |
Brazil (20) | 0.957 ± 0.028 | 14 | 52 | 57 | 26 | 31 | |
BAG + SIRN (19) | 0.959 ± 0.030 | 14 | 52 | 57 | 26 | 31 | |
Entamoeba dispar (21) | All (21) | 0.500 ± 0.132 | 7 | 26 | 22 | 16 | 6 |
Asia (3) | 0.000 ± 0.000 | 1 | 0 | 0 | 0 | 0 | |
Brazil (18) | 0.568 ± 0.137 | 7 | 26 | 22 | 16 | 6 | |
TER (2) | 0.625 ± 0.139 | 7 | 26 | 22 | 16 | 6 | |
BAG + SIRN (16) | 0.000 ± 0.000 | 1 | 0 | 0 | 0 | 0 | |
E. hartmanni (10) | All (10) | 0.977 ± 0.054 | 9 | 28 | 24 | 16 | 8 |
Brazil (8) | 0.964 ± 0.077 | 7 | 28 | 24 | 16 | 8 | |
E. histolytica (6) | All (6) | 0.533 ± 0.172 | 2 | 4 | 2 | 1 | 1 |
North America (3) | 0.000 ± 0.000 | 1 | 0 | 0 | 0 | 0 | |
Brazil (2) | 0.000 ± 0.000 | 1 | 0 | 0 | 0 | 0 | |
All* (89) | 0.9625 ± 0.0126 | 55 | 353 | 272 | 203 | 199 | |