From: Wolbachia: endosymbiont of onchocercid nematodes and their vectors
Primer name | Gene targeted | Type of PCR | Product size | References |
---|---|---|---|---|
99F, 99R | 16S rRNA | cPCR | 895 | |
Wspecf, Wspecr | 16S rRNA | cPCR | 438 | [165] |
16SWolbf, 16SWolbr | 16S rRNA | cPCR | 1014 | [34] |
INTF1, INTR | 16S rRNA | cPCR | 130 | [166] |
INTF2, INTR2 | 16S rRNA | cPCR | 136 | [166] |
553F_W, 1334R_W | 16S rRNA | cPCR | 781 | [54] |
WolbF, Wspecr | 16S rRNA | cPCR | Â | [167] |
63f, 1387R, 76f, 1012R | 16S rRNA | Nested PCR | 852 | [168] |
WN16S-F, WN16S-R | 16S rRNA | qPCR | Â | [169] |
W-Specf, W-Specr, | 16S rRNA | qPCR | 438 | [170] |
W-Specf, W16S | 102 | |||
WSPintF, WSPintR | wsp | cPCR | 576 | |
81F, 691R | wsp | cPCR | 610 | |
136 F, 691R | wsp (Group A) | 556 | ||
308 F, 691R | wsp (Subgroup Mel) | 405 | ||
328 F, 691R | wsp (Subgroup AlbA) | 379 | ||
173F, 691R | wsp (Subgroup Mel and AlbA) | 541 | ||
181F, 691R | wsp (Subgroup wPap) | 506 | ||
165F, 691R | wsp (Subgroup wAus) | 506 | ||
81F, 531R | wsp (Subgroup wPap and wAus) | 460 | ||
81 F, 522R | wsp (Group B) | 442 | ||
183F, 691R | wsp (Subgroup Pip) | 501 | ||
wspF, wspR, grF, grR | wsp | qPCR | Â | [172] |
wspTMF, wspTMR | wsp | qPCR | Â | [59] |
WSP.F3, WSP.B3, WSP.FIP, WSP.BIP | wsp | LAMP assay | Â | [173] |
FIP_wMel/wPop | wsp (wMel/ wPop) | LAMP assay | Â | [59] |
BIP_wMel/wPop | ||||
F3_wMel/wPop | ||||
B3_wMel/wPop | ||||
LpF_wMel/wPop | ||||
LpB_wMel/wPop | ||||
ftsZ_F1, ftsZ_R1 | FtsZ | cPCR | 524 | [40] |
FtsZUniF, FtsZUniR | FtsZ | cPCR | Â | [174] |
ftsZfl, ftsZrl | FtsZ | cPCR | 1043–1055 | [38] |
Wol1F, Wol1R, Wol7F, Wol7R | FtsZ | Nested PCR | 147 | [175] |
MLST primers | 16Â s rRNA, gatB, FtsZ, hcpA, fbpA coxA. wsp | MLST | Â | [40] |
ftsZ 291, ftsZ 477 | FtsZ | qPCR | Â | [176] |
WSP 420, WSP 583 | wsp | |||
Bm-wFtsZ-F, BmwFtsZ-R | FtsZ | qPCR | Â | [96] |
groEL-F, groEL-R | groEL | cPCR | Â | [32] |
WgroF1, WgroRev1 | groEL | cPCR | 873 | [35] |
WgltAF1, WgltARev1 | Citrate synthase (gltA) | cPCR | 627 | [35] |
FbpA_F1, FbpA_R1 | FbpA | cPCR | 509 | [40] |
hcpA_F1, hcpA_R1 | HcpA | cPCR | 516 | [40] |
coxA_F1, coxA_R1 | coxA | cPCR | 487 | [40] |
COIintF, COIintR | COI | cPCR | 689 | [34] |
Wseq01F, Wseq02R | gatB | cPCR | 471 | [31] |