Samples | Models | R2X (cumulative) | R2Y (cumulative) | Q2(cumulative) | Q2 |
---|
All | PCA-X | 0.34 | Â | 0.036 | Â |
Case 1–Con 1a | PLS-DA | 0.37 | 0.95 | 0.81 |  |
OPLS-DA | 0.37 | 0.95 | 0.86 | − 0.61 |
- R2Y metric describing the percentage of Y matric explained by the model, Q2 (cumulative) metric describing the predictive ability of the model, Q2 metric representing a parameter that describes whether the OPLS-DA opls-da model is over-fitted, PCA principal component analysis, PLS-DA partial least squares-discriminant analysis, OPLS-DA orthogonal partial least squares-discriminant analysis,
- aCase 1: experimental group (Cryptosporidium baileyi-infected chickens); Con 1: mock-inoculated (with phosphate buffered saline) group