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Table 2 Intraspecific polymorphisms of the sequences of C. obsoletus (ss) populations evaluated in this study and of georeferenced sequences retrieved from GenBank

From: A study of the composition of the Obsoletus complex and genetic diversity of Culicoides obsoletus populations in Spain

IDa

Number of sequences

GC content

h

Hd (SD)

S

Ï€ (SD)

AL (Genbank)

6

0.339

2

0.600 (0.129)

2

0.00263 (0.00056)

AS (this study)

10

0.340

4

0.822 (0.072)

3

0.00297 (0.00049)

AV (this study)

18

0.338

8

0.895 (0.038)

7

0.00455 (0.00064)

B (Genbank)

30

0.339

11

0.851 (0.046)

10

0.00442 (0.00048)

C (this study)

22

0.339

8

0.823 (0.050)

10

0.00465 (0.00082)

CO (Genbank)

13

0.339

4

0.731 (0.079)

5

0.00424 (0.00072)

CS (this study)

22

0.339

6

0.723 (0.085)

8

0.00492 (0.00071)

GC1 (this study)

13

0.339

2

0.154 (0.126)

1

0.00034 (0.00028)

GC2 (Genbank)

37

0.339

2

0.054 (0.050)

1

0.00012 (0.00011)

GC3 (Genbank)

11

0.339

2

0.182 (0.144)

1

0.00040 (0.00031)

GR (Genbank)

16

0.339

4

0.617 (0.096)

5

0.00315 (0.00068)

IB (Genbank)

26

0.339

4

0.625 (0.054)

5

0.00324 (0.00051)

SE (this study)

5

0.339

2

0.400 (0.237)

3

0.00263 (0.00156)

TF (Genbank)

9

0.339

1

–

0

–

Total

238

0.339

23

0.690 (0.028)

22

0.00372 (0.00022)

  1. The analysis was performed using a 457-bp alignment
  2. h Number of haplotypes, Hd haplotype (gene) diversity, S number of variable sites, π nucleotide diversity (per site)
  3. aIdentifies the geographical location (see Fig. 1)