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Table 2 Intraspecific polymorphisms of the sequences of C. obsoletus (ss) populations evaluated in this study and of georeferenced sequences retrieved from GenBank

From: A study of the composition of the Obsoletus complex and genetic diversity of Culicoides obsoletus populations in Spain

IDa Number of sequences GC content h Hd (SD) S π (SD)
AL (Genbank) 6 0.339 2 0.600 (0.129) 2 0.00263 (0.00056)
AS (this study) 10 0.340 4 0.822 (0.072) 3 0.00297 (0.00049)
AV (this study) 18 0.338 8 0.895 (0.038) 7 0.00455 (0.00064)
B (Genbank) 30 0.339 11 0.851 (0.046) 10 0.00442 (0.00048)
C (this study) 22 0.339 8 0.823 (0.050) 10 0.00465 (0.00082)
CO (Genbank) 13 0.339 4 0.731 (0.079) 5 0.00424 (0.00072)
CS (this study) 22 0.339 6 0.723 (0.085) 8 0.00492 (0.00071)
GC1 (this study) 13 0.339 2 0.154 (0.126) 1 0.00034 (0.00028)
GC2 (Genbank) 37 0.339 2 0.054 (0.050) 1 0.00012 (0.00011)
GC3 (Genbank) 11 0.339 2 0.182 (0.144) 1 0.00040 (0.00031)
GR (Genbank) 16 0.339 4 0.617 (0.096) 5 0.00315 (0.00068)
IB (Genbank) 26 0.339 4 0.625 (0.054) 5 0.00324 (0.00051)
SE (this study) 5 0.339 2 0.400 (0.237) 3 0.00263 (0.00156)
TF (Genbank) 9 0.339 1 0
Total 238 0.339 23 0.690 (0.028) 22 0.00372 (0.00022)
  1. The analysis was performed using a 457-bp alignment
  2. h Number of haplotypes, Hd haplotype (gene) diversity, S number of variable sites, π nucleotide diversity (per site)
  3. aIdentifies the geographical location (see Fig. 1)