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Table 2 Summary of results of PCR-positive individuals/samples with ITS2 sequences exploitable for phylogenetic analyses

From: Soil-transmitted helminth infections in free-ranging non-human primates from Cameroon and Gabon

Locality NHP species na PCR-positive for Necator spp. ITS2 phylogeny Necator spp. PCR-positive for Oesophag.sp. ITS2 phylogeny Oesophagostomum. spp. PCR-positive for Trichuris spp. ITS2 phylogeny Trichuris spp.
Djoum (CAM) Mandrill 12 0 8 3 0
Red-capped mangabey 7 0 3 2 0
Greater spot-nosed monkey 1 0 0 0
Somalomo (CAM) Chimpanzee 23 20 (87.0%) 9 22 (95.7%) 17 0
Gorilla 38 24 (63.2%) 1 38 (100%) 26 0
Red-capped mangabey 2 2 0 2 1 0 -
Greater spot-nosed monkey 2 1 0 2b 2b 1 1
Mambélé (CAM) Chimpanzee 59 17 (28.8%) 10 34 (+ 1b) (57.6%) 22 (+ 1b) 2 (3.4%) 1
Gorilla 12 2 (16.7%) 1 8 (66.7%) 8 1 (3.7%) 1
Agile mangabey 3 1 1 2 2 0
Greater spot-nosed monkey 1 0 - 1b 1b 0
Lobéké NP (CAM) Gorilla 15 9 (60.0%) 2 5 (33.3%) 1 0 -
Matakamangoye (GAB) Chimpanzee 140 63 (45.0%) 50 101 (72.1%) 90
Total   315 139(44.1%) 75 223 (+ 4b) (70.8%) 172 (+ 4b) 4 (1.3%) 3
  1. CAM Cameroon, GAB Gabon, NHP non-human primates, NP National Park
  2. an represents the number of individuals tested (chimpanzee, gorilla) or of samples tested (all other NHP species)
  3. bSequences of Ternidens deminutus not used in the phylogenetic tree