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Table 3 Results of AMOVA models on H. canis populations with no groups defined a priori (a) and (b) grouped into two groups, New World and Old World (America, Europe + Africa + Asia) and (c) grouped into three groups (America, Africa, Asia + Europe) or (d) four groups (America, Africa, Asia, Europe) according to geographical distribution in the continents

From: Phylogeography and population differentiation in Hepatozoon canis (Apicomplexa: Hepatozoidae) reveal expansion and gene flow in world populations

 

df

Sum of squares

18S rRNA

%

Fixation indices

Estimated variance

a. No groups defined

 Among populations

35

604.762

1.0673

42.62

 

 Within populations

214

734.886

1.4297

57.38

FST = 0.42***

 Total

549

1339.647

2.4818

  

b. Two groups

 Among groups

1

31.568

0.0315

1.25

FCT = 0.01ns

 Among pop. within groups

34

573.194

1.0555

41.94

FSC = 0.42***

 Within populations

514

734.886

1.4297

56.81

FST = 0.43 ***

 Total

549

1339.647

2.5168

  

c. Three groups

 Among groups

2

78.347

0.0844

3.33

FCT = 0.03ns

 Among pop. within groups

33

526.414

1.0200

40.25

FSC = 0.41***

 Within populations

514

734.886

1.4297

56.42

FST = 0.43***

 Total

549

1339.647

2.5342

  

d. Four groups

 Among groups

3

178.689

0.2979

11.56

FCT = 0.11ns

 Among pop. within groups

32

426.072

0.8504

32.99

FSC = 0.37***

 Within populations

514

734.886

1.4297

76.02

FST = 0.44***

 Total

549

1339.647

2.5781

  

e. SAMOVA

 Among groups

4

438.802

1.2680

11.56

FCT = 0.42***

 Among pop. within groups

31

165.959

0.2722

32.99

FSC = 0.15***

 Within populations

514

734.886

1.4297

76.02

FST = 0.51***

 Total

549

1339.647

2.9699

  
  1. ns not significant (p > 0.05), **p < 001, ***p < 0.0001
  2. SAMOVA K = 5 groups