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Table 2 Overview of nanopore sequencing run statistics for LD-RPA amplicon samples

From: Evaluation of molecular assays to detect Leishmania donovani in Phlebotomus argentipes fed on post-kala-azar dermal leishmaniasis patients

Sample ID

Run length (hours)

Reads generated

Passed reads (%)

Amplicon coverage (%)

Nucleotide consensus similarity (primer-free) (%)

Amplification assay

LD-RPA

LD-qPCR

DL-DNA-2-004

8

56,529

49,352 (87.3%)

100

94.8

+

DL-DNA-2-014

8

30,027

25,357 (84.4)

100

94.9

+