Table 3 Average percent identity of Lake County isolates compared to other known Onchocerca isolates, using NCBI BLAST analysis, at the nd5 gene level
From: Presence of a cryptic Onchocerca species in black flies of northern California, USA
Lake County, CA | |||||||
|---|---|---|---|---|---|---|---|
Accession numbers | MZ420192 | MZ420193 | MZ420194 | MZ420195 | MZ420198 | MZ420196 | MZ420197 |
Los Angeles, CA [18] | 99.76% (98.57–100%) | 99.76% (98.57–100%) | 99.76% (98.57–100%) | 99.76% (98.57–100%) | 99.76% (98.57–100%) | 99.76% (98.57–100%) | 99.26% (97.87–100%) |
Upstate New York [17] | 96.42% (94.57–100%) | 96.42% (94.57–100%) | 96.42% (94.57–100%) | 96.42% (94.57–100%) | 96.42% (94.57–100%) | 96.42% (94.57–100%) | 95.70% (94.03–97.37%) |
Onchocerca sp. [15] | 92.09% (91.94–92.04%) | 92.08% (91.92–92.38%) | 92.09% (91.94–92.04%) | 92.09% 91.94–92.04%) | 92.08% (91.92–92.38%) | 92.12% (91.86–92.43%) | 91.95% (91.63–92.36%) |
Onchocerca lupi | 91.81% (91.74–92.00%) | 91.79% (91.72–92.00%) | 91.81% (91.74–92.00%) | 91.81% (91.94–92.00%) | 91.79% (91.72–92.00%) | 91.82% (91.76–92.00%) | 92.05% (91.99–92.24%) |