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Table 1 Summary of RNA-seq data obtained from pepsin-treated E. granulosus protoscoleces at 0, 12 and 24 h post-treatment

From: Genome-wide transcriptome analysis of the early developmental stages of Echinococcus granulosus protoscoleces reveals extensive alternative splicing events in the spliceosome pathway

Samples

Q30a

High-quality reads

Total read length (bp)

Mapped reads with STAR (%)

NT

0.984

6,994,764

528,313,589

49.1

PEP

0.983

7,348,062

554,809,442

48.4

12 h

0.985

8,308,408

627,289,019

54.7

24 h

0.982

8,315,180

627,939,696

53.4

  1. NT non-treated, PEP Initial pepsin treatment, 12 h 12 h pepsin treatment, 24 h 24 h pepsin treatment
  2. aQ30: Phred Quality Score; the probability of incorrect base call: 1 in 1000