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Table 2 Sequence information for SFTSV isolates

From: Identification of severe fever with thrombocytopenia syndrome virus genotypes in patients and ticks in Liaoning Province, China

SFTSV strain

Source

Geographical origina

Time of isolation

Genotype (L/M/S)b

Sequence similarity (%)

L segment

M segment

S segment

Nucleotide

AA

Nucleotide

AA

Nucleotide

AA

LNHDD2019-9

Human serum

DD, LN

September 2019

A/A/A

99.98

100

99.08

99.63

100

100

LNHDG2019-6

Human serum

DG, LN

June 2019

A/A/A

99.98

100

99.08

99.63

100

100

LNTEDG2019-6

Haemaphysalis longicornis

Erdaogou, DD, LN

June 2019

A/A/A

99.98

100

99.08

99.63

100

100

LNTYJ2019-6

H.longicornis

YJ, JL

June 2019

A/A/A

99.98

100

99.08

99.63

100

100

  1. AA, Amino acid; SFTSV, severe fever with thrombocytopenia syndrome virus
  2. aDD, Dandong City; LN, Liaoning Province; DG, Donggang City; YJ, Yanji City; JL, Jilin Province
  3. bThe SFTSV genome is composed of three independent gene segments: L segment (6368 bp), M segment (3378 bp) and the antisense S segment (1744 bp). There are 6 known (A‒F) genotypes of SFTSV. For more detail, see text