Table 1 Comparison of mt genome position, length, codons, and anticodon usage in the Raillietina sp. mt1 and mt2
From: Heteroplasmic mitochondrial genomes of a Raillietina tapeworm in wild Pangolin
Gene | Position | Length | Codon | Anticodon | ||
|---|---|---|---|---|---|---|
Start to End | No nt | No a.a | Start | Stop | ||
cox1 | 1-1644/1-1644 | 1644/1644 | 548/548 | ATG/ATG | TAA/TAA | |
trnT | 1630-1694/1630-1694 | 65/65 | TGT/TGT | |||
rrnL | 1695-2672/1695- 2672 | 978/978 | ||||
trnC | 2673-2742/2672-2741 | 70/70 | GCA/GCA | |||
rrnS | 2743-3472/2742-3471 | 730/730 | ||||
cox2 | 3473-4042/3472-4041 | 570/570 | 190/190 | ATG/ATG | TAA/TAA | |
trnE | 4052-4115/4051-4114 | 64/64 | TTC/TTC | |||
nad6 | 4119-4577/4118-4576 | 459/459 | 153/153 | ATG/ATG | TAG/TAG | |
trnY | 4580-4646/4579-4645 | 67/67 | GTA/GTA | |||
NCR1 | 4647-4830/4646-4829 | 184/184 | ||||
trnS2 | 4831-4901/4830-4900 | 71/71 | TGA/TGA | |||
trnL1 | 4903-4976/4902-4975 | 74/74 | TAG/TAG | |||
trnL2 | 5002-5066/5001-5065 | 65/65 | TAA/TAA | |||
trnR | 5129-5188/5128-5187 | 60/60 | ACG/ACG | |||
nad5 | 5248-6822/5248-6822 | 1575/1575 | 525/525 | ATG/ATG | TAA/TAA | |
NCR2 | 6823-7411/6823-7411 | 589/589 | ||||
trnG | 7412-7481/7412-7481 | 70/70 | TCC/TCC | |||
cox3 | 7498-8142/7499-8143 | 645/645 | 215/215 | ATG/ATG | TAG/TAG | |
trnH | 8152-8225/8153-8226 | 74/74 | GTG/GTG | |||
cytb | 8229-9341/8230-9342 | 1113/1113 | 371/371 | ATG/ATG | TAG/TAG | |
nad4L | 9334-9594/9335-9595 | 261/261 | 87/87 | ATG/ATG | TAG/TAG | |
nad4 | 9561-10814/9562-10815 | 1254/1254 | 418/418 | ATG/ATG | TAG/TAA | |
trnQ | 10816-10879/10817-10880 | 64/64 | TTG/TTG | |||
trnF | 10885-10947/10886-10948 | 63/63 | GAA/GAA | |||
trnM | 10945-11013/10946-11014 | 69/69 | CAT/CAT | |||
atp6 | 11020-11526/11021-11527 | 507/507 | 169/169 | ATG/ATG | TAA/TAA | |
nad2 | 11530-12408/11531-12409 | 879/879 | 293/293 | ATG/ATG | TAG/TAG | |
trnV | 12413-12476/12414-12477 | 64/64 | TAC/TAC | |||
trnA | 12499-12567/12507-12575 | 69/69 | TGC/TGC | |||
trnD | 12573-12640/12582-12649 | 68/68 | GTC/GTC | |||
nad1 | 12650-13540/12659-13549 | 891/891 | 297/297 | ATG/ATG | TAA/TAA | |
trnN | 13565-13625/13574-13634 | 61/61 | GTT/GTT | |||
trnP | 13639-13704/13648-13713 | 66/66 | TGG/TGG | |||
trnI | 13705-13770/13714-13779 | 66/66 | GAT/GAT | |||
trnK | 13781-13842/13790-13851 | 62/62 | CTT/CTT | |||
nad3 | 13853-14200/13862-14209 | 348/348 | 116/116 | ATG/ATG | TAA/TAA | |
trnS1 | 14200-14259/14209-14268 | 60/60 | GCT/GCT | |||
trnW | 14263-14325/14273-14335 | 63/63 | TCA/TCA | |||