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Table 2 Comparison of Raillietina sp. mt1 and mt2 sequences with Raillietina tetragona and Hymenolepis diminuta based on nucleotide sequence identity (%) of PCGs, NCR, and rRNA

From: Heteroplasmic mitochondrial genomes of a Raillietina tapeworm in wild Pangolin

Gene Gene length (bp) Sequence identity (%)
mt1*
14331
mt2
14341
RT
14444
HD
13708
mt1*/mt2 mt1*/RT mt1*/HD
cox1 1644 1644 1617 1593 95.8 81.7 75.1
cox2 570 570 573 579 96.3 79.7 71.3
nad6 459 459 456 459 93.2 70.5 62.7
nad5 1575 1575 1581 1575 94.9 71.0 64.0
cox3 645 645 648 651 95.6 74.3 62.3
cytb 1113 1113 1092 1098 95.2 79.8 67.2
nad4L 261 261 270 261 95.0 70.7 72.7
nad4 1254 1254 1251 1248 93.7 75.3 65.0
atp6 507 507 507 516 95.4 74.1 65.6
nad2 879 879 738 882 96.1 66.6 67.9
nad1 891 891 891 891 94.3 78.1 74.4
nad3 348 348 348 348 97.1 79.3 68.3
NCR1 184 184 178 185 94.5 31.6 19.5
NCR2 589 589 728 261 100.0 27.6 16.1
rrnL 978 978 971 967 96.9 79.3 66.8
rrnS 730 730 699 715 97.5 80.2 73.8
Total identity 95.6 74.5 71.7
  1. Raillietina tetragona (RT); Hymenolepis diminuta (HD); * mt1 was the reference