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Table 4 Sequencing results based on the recG gene in tick and small mammal samples that did not yield multilocus sequence typing products

From: Diversity of Borrelia burgdorferi sensu lato in ticks and small mammals from different habitats

Sample Borrelia genospecies Most similar sequence
Sample identifier (ID) Host species Collection site Habitat Identity (%) GenBank ID
HT1 Ixodes ricinus UH18 Grassland Borrelia spielmanii 100 AB526160
HT7 I. ricinus UH18 Grassland Borrelia valaisiana 100 CP009117
HT15 I. ricinus UH18 Grassland Borrelia afzelii 99.7 CP000395
HT20 I. ricinus UH18 Forest B. spielmanii 99 AB526160
HT32 I. ricinus UH16 Forest B. afzelii 100 JX971362
HT38 I. ricinus UH16 Forest B. afzelii 99.9 CP009058
HT68 I. ricinus Kyf2 Forest B. valaisiana 99.9 CP009117
HT81 I. ricinus E3 Grassland B. afzelii 100 JX971362
HT99 I. ricinus E3 Grassland Borrelia garinii 99.1 JF331209
HT115 I. ricinus E3 Forest B. valaisiana 100 CP009117
HT126 I. ricinus E1 Grassland Borrelia lusitaniae 100 MH747538
HT192 I. ricinus E1 Forest B. garinii 100 JF331209
HT199 I. ricinus E1 Forest B. afzelii 99.9 JX971362
HT217 I. ricinus E1 Forest B. lusitaniae 99.7 MH747538
HT261 I. ricinus UH7 Grassland Borrelia burgdorferi s.s. 98.6 JF419041
HT298 I. ricinus UH9 Grassland B. afzelii 97.1 JX971362
HT303 I. ricinus UH9 Grassland B. garinii 100 JF331209
HT307 I. ricinus UH9 Grassland B. garinii 100 AB555923
HT310 I. ricinus UH9 Grassland B. afzelii 97.1 JX971362
HT324 I. ricinus UH9 Forest B. valaisiana 99.7 CP009117
HT331 I. ricinus UH9 Forest B. afzelii 100 JX971362
HT332 I. ricinus UH9 Forest B. afzelii 99.9 CP002933
HT375 I. ricinus UH1 Grassland B. valaisiana 99.3 MG972813
KS18/1496 Sorex araneus UH12 Grassland B. afzelii 100 MG972813
KS19/1709 Microtus arvalis UH16 Grassland B. garinii 100 CP028861
KS19/2049 M. arvalis UH1 Grassland B. afzelii 100 CP018262