Table 3 Haplotype statistics and tests of neutrality from full TEP1-TED sequences
From: Vectorial capacity and TEP1 genotypes of Anopheles gambiae sensu lato mosquitoes on the Kenyan coast
Test | TEP1 alleles | |||
|---|---|---|---|---|
All alleles | TEP1*S1 | TEP1*R2 | TEP1*R3 | |
No. sequences | 110 | 48 | 54 | 8 |
Length (bp) | 758 | 758 | 758 | 758 |
No. haplotypes | 66 | 47 | 18 | 1 |
Haplotype diversity | 0.890 | 0.999 | 0.583 | 0.000 |
No. variable sites | 116 | 92 | 83 | 0 |
No. mutations | 121 | 92 | 83 | 0 |
Nucleotide diversity | 0.056 | 0.050 | 0.020 | 0.000 |
Tajima’s D | 2.747 | 2.996 | -0.555 | NA |
Fu and Li’s D | 1.426 | 1.297 | 0.861 | 0.000 |
Fu and Li’s F | 2.398 | 2.298 | 0.392 | 0.000 |