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Table 2 Genetic diversity of Pvs230 among global isolates

From: Genetic diversity in the transmission-blocking vaccine candidate Plasmodium vivax gametocyte protein Pvs230 from the China–Myanmar border area and central Myanmar

Region

Country

n

S

η

k

π ± SD

NS

SP

H

Hd ± SD

GenBank accession numbers

East Asia

China–Myanmar

143

30

31

5.558

0.002 ± 0.000

22

9

47

0.935 ± 0.009

 

Central China

20

14

14

3.711

0.001 ± 0.000

12

2

11

0.911 ± 0.042

AB574574–AB574555

Southeast Asia

Myanmar

23

19

20

3.553

0.001 ± 0.000

17

3

15

0.925 ± 0.042

 

Thailand

20

19

20

4.411

0.002 ± 0.000

16

4

15

0.968 ± 0.025

AB574575–AB574594

West Asia

Turkey

20

6

7

1.774

0.001 ± 0.000

5

2

5

0.511 ± 0.128

AB574528–AB574547

Africa

Madagascar

7

7

7

2.762

0.001 ± 0.000

5

2

6

0.952 ± 0.096

AB574548–AB574554

South America

Brazil

20

8

8

3.079

0.001 ± 0.000

6

2

6

0.768 ± 0.062

AB574508–AB574527

Oceania

PNG

21

12

12

2.248

0.001 ± 0.000

9

3

9

0.767 ± 0.090

AB574595–AB574615

 

Total

274

46

48

5.541

0.002 ± 0.000

32

16

92

0.968 ± 0.004

 
  1. n, number of isolates; S, number of polymorphic (segregating) sites; η, the total number of mutations; k, the average number of nucleotide differences; π, nucleotide diversity; NS, number of sites with non-synonymous polymorphisms; SP, number of sites with synonymous polymorphisms; H, number of haplotypes; Hd, haplotype diversity; SD, standard deviation; PNG, Papua New Guinea population