Table 1 Estimates of genetic diversity and neutrality indices of Plasmodium vivax rama gene
Region | G + C content (%) | No. of haplotypes | Hd | Ka/Ks | Diversity (± SD) | Tajima's D | FU and Li's D* | FU and Li's F* | |
|---|---|---|---|---|---|---|---|---|---|
Nucleotide | Haplotype | ||||||||
Exon 1 | 37.2 | 1 | 0 | / | 0 | 0 | / | / | / |
Exon 2 | 49.1 | 7 | 0.726 | 0.281 | 0.00133 ± 0.00217 | 0.726 ± 0.081 | − 1.24312 | 0.81213 | 0.23013 |
Exon 3 | 50.6 | 9 | 0.658 | 0.418 | 0.00157 ± 0.00343 | 0.658 ± 0.699 | − 1.77017 | − 2.20665 | − 2.42048 |
Exon 4 | 51.7 | 3 | 0.489 | / | 0.01132 ± 0.01092 | 0.489 ± 0.098 | 0.04606 | 0.82564 | 0.70161 |
Exon 5 | 47.6 | 1 | 0 | / | 0 | 0 | / | / | / |
Exon 6 | 47.2 | 1 | 0 | / | 0 | 0 | / | / | / |
Full-length | 49.8 | 22 | 0.982 | 0.433 | 0.00190 ± 0.00396 | 0.982 ± 0.018 | − 1.98598* | − 2.24879 | − 2.54566 |