Table 1 Characteristics of the RNA-seq results obtained in the present study
From: Transcriptome analysis of a newly established mouse model of Toxoplasma gondii pneumonia
Groups | Sample | All reads | Cleans reads | Clean bases | Mapped rate (%) | Q20 rate (%) | Q30 rate (%) | GC content (%) |
|---|---|---|---|---|---|---|---|---|
Control | PBS 1 | 53,645,848 | 53,100,000 | 7,756,700,000 | 96.50 | 97.60 | 93.21 | 49.66 |
PBS 2 | 40,765,488 | 40,362,000 | 5,924,500,000 | 96.50 | 97.61 | 93.22 | 49.63 | |
PBS 3 | 58,661,660 | 58,067,000 | 8,522,200,000 | 96.60 | 97.72 | 93.48 | 50.08 | |
RH | RH 1 | 51,686,308 | 51,297,794 | 7,576,799,674 | 96.00 | 97.76 | 93.54 | 48.50 |
RH 2 | 59,174,998 | 58,635,374 | 8,583,541,805 | 95.60 | 97.74 | 93.49 | 49.58 | |
RH 3 | 58,817,144 | 58,236,720 | 8,521,935,992 | 95.60 | 97.64 | 93.32 | 49.05 | |
TGME49 | TMGE49 1 | 58,164,082 | 57,647,000 | 8,451,100,000 | 95.70 | 97.74 | 93.49 | 49.29 |
TGME49 2 | 52,661,872 | 52,197,000 | 7,637,200,000 | 95.90 | 97.64 | 93.32 | 48.43 | |
TGME49 3 | 36,605,664 | 36,289,000 | 5,354,300,000 | 96.00 | 97.55 | 93.09 | 49.39 |