Skip to main content

Table 2 Comparison of traditional algorithms

From: Development and validation of a machine learning algorithm prediction for dense granule proteins in Apicomplexa

Method

AUPRC

Precision

Accuracy

AUC

F1

Recall

Specificity

MVA-GCN

0.9088a

1.0000a

0.9658a

0.9673a

0.8181a

0.6923a

1.0000a

SVM

0.7815b

0.8078b

0.9369b

0.6943

0.7531b

0.6117b

0.9800

RF

0.3639

0.5148

0.8831

0.8069b

0.1306

0.0771

0.9912b

DT

0.5360

0.5823

0.9343

0.7015

0.4996

0.4409

0.9553

  1. aHighest value of each indicator
  2. bSecond-best value of each indicator