Rickettsiae in red fox (Vulpes vulpes), marbled polecat (Vormela peregusna) and their ticks in northwestern China

Previously, twelve Rickettsia species were identified in ticks, fleas, sheep keds (Melophagus ovinus), bats (Pipistrellus pipistrellus) and a tick-bitten patient in the Xinjiang Uygur Autonomous Region (XUAR) in northwestern China. Here we aimed to molecularly detect rickettsial agents in red fox (Vulpes vulpes), marbled polecat (Vormela peregusna) and their ticks. During 2018–2019, 12 red foxes, one marbled polecat and their ticks were sampled in two counties and a city of the XUAR. The heart, liver, spleen, lung and kidney of these 13 carnivores were dissected, followed by DNA extraction. Hard ticks were identified both morphologically and molecularly. All samples were examined for the presence of rickettsiae by amplifying four genetic markers (17-kDa, gltA, ompA, sca1). A total of 26 adult ticks and 28 nymphs (38 Ixodes canisuga, nine Ixodes kaiseri, six Haemaphysalis erinacei and one Dermacentor marginatus) were collected from red foxes, and four Ha. erinacei ticks were removed from the marbled polecat. Analysis of cytochrome c oxidase subunit I (COI) gene sequences indicated that 2–32 nucleotides differed between I. canisuga, I. kaiseri and Ha. erinacei from northwestern China and Europe. Rickettsia raoultii was detected in three red foxes, Candidatus Rickettsia barbariae in a red fox, Rickettsia sibirica in a red fox and a marbled polecat, and R. raoultii in two tick species (I. canisuga and D. marginatus). To the best of our knowledge, I. canisuga and I. kaiseri have not been previously reported from red foxes in China. The DNA of R. sibirica and R. raoultii was detected for the first time in the organs of red foxes, and R. sibirica in the organs of a marbled polecat. This is also the first molecular evidence for the presence of R. raoultii in I. canisuga. Our findings expand the range of tick-borne pathogens in wildlife species and associated ticks in China.


Background
The red fox (Vulpes vulpes) is widely distributed throughout Europe, Asia, North Africa and North America [1]. Its habitats strongly overlap with those of other wildlife species, domestic animals and even humans [2]. Previously, red foxes were reported to harbor several vector-borne pathogens of public health concern, including tick-borne encephalitis virus [3], Borrelia burgdorferi [4], Ehrlichia canis [5], Leishmania infantum [6], Hepatozoon canis [7] and Babesia vulpes [8,9]. A serological investigation of red foxes in Spain indicated that 50.3% had antigens of spotted fever group rickettsiae, including Rickettsia massiliae and R. conorii [10]. In addition, immunofluorescence assay showed that 1.9% of red foxes had antibodies to R. typhi, and 6.7% to R. slovaca in Spain [4].
The geographic range of the marbled polecat (Vormela peregusna) covers Central Asia, northwestern China and Europe [2]. In studies on its epidemiological role, seroconversion to plague F1 antigen was detected in a marbled polecat in the Xinjiang Uygur Autonomous Region (XUAR) [11] in northwestern China. Borrelia burgdorferi sensu lato and Babesia sp. were molecularly identified in a marbled polecat in Romania and China, respectively [12,13]. Furthermore, R. raoultii and Candidatus Rickettsia barbariae were molecularly identified in marbled polecats in the XUAR [13].

Sample collection and species identification
A total of 12 red foxes killed by illegal hunting or found as roadkill and one marbled polecat that died of natural causes were sampled in two counties and a city of the XUAR during 2018-2019 (data shown in Additional file 1). The red foxes and the marbled polecat were morphologically identified by an experienced zoologist. The heart, liver, spleen, lung and kidney of all 13 carcasses were removed. Simultaneously, the entire body surface of each individual was checked for ticks, all of which were removed. The ticks were morphologically identified to the species level according to the standard taxonomic keys as described previously [29]. This was also confirmed by molecular and phylogenetic analyses based on two mitochondrial markers, the 16S rRNA and the cytochrome c oxidase subunit I (COI) genes [17].

Detection, sequencing and phylogenetic analysis of rickettsiae
Genomic DNA was extracted from the organs (heart, liver, spleen, lung and kidney) of wild carnivores as well as from their ticks using the TIANamp Genomic DNA Kit (TIANGEN, Beijing, China). To investigate the presence of rickettsiae in ticks, four genetic markers were targeted, including the 17 kDa antigen (17-kDa), citrate synthase (gltA), outer membrane protein A (ompA) and surface cell antigen 1 (sca1) genes. Two genes (gltA and ompA) were used to detect rickettsiae in the organs of wild carnivores [30]. The primers and polymerase chain reaction (PCR) cycling conditions used in this study are shown in Additional file 2. Each PCR assay included a negative control (distilled water instead of DNA template) and a positive control (containing sequenceverified DNA of R. massiliae from Rh. turanicus ticks collected in the XUAR) [22]. Purification and sequencing of the PCR products were performed as described previously [31,32]. Sequences were manually edited, aligned and compared to reference GenBank sequences by the nucleotide BLASTn program (https:// blast. ncbi. nlm. nih. gov). A phylogenetic tree was constructed using the maximum likelihood method in MEGA 7.0 software [18].

Tick identification
A total of 26 adult ticks and 28 nymphs (i.e., 38 I. canisuga, 9 I. kaiseri, 6 Ha. erinacei and 1 D. marginatus) were collected from 12 red foxes, and four Ha. erinacei ticks were found on the marbled polecat. Morphological features are shown in Additional file 3: Fig. S1.

Molecular and phylogenetic analyses
Analysis of COI sequences revealed 2-32 nucleotide differences in the case of I. canisuga (3-6 bp), I. kaiseri (2-7 bp) and Ha. erinacei (30-32 bp) between Europe and China. Phylogenetic analysis showed that (i) I. canisuga in the XUAR was in a basal position to 11 European haplotypes ("A to K") [17] (Fig. 1a); (ii) I. kaiseri from red foxes in the XUAR was also in basal position to nine European haplotypes ("L to T"), and had an identical sequence with conspecific ticks from long-tailed ground squirrels and Asian badgers [17,30,33] (Fig. 1b); (iii) Ha. erinacei from red foxes and marbled polecat had identical sequences, and formed a distinct clade from those reported in Turkey, Italy and Romania (Fig. 1c); and (iv) D. marginatus from red fox #2 had an identical sequence with the off-host tick collected formerly in Altaw City, XUAR.
Red foxes #3, #5 and #11 were positive for R. raoultii, and red fox #8 was positive for Candidatus R. barbariae. At the same time, red fox #12 and the marbled polecat were positive for R. sibirica. In addition, R. raoultii was detected in I. canisuga from red fox #11 (Manas County) and D. marginatus from red fox #2 (Nilka County). Nucleotide sequences of rickettsial agents were deposited in the GenBank database (MT890502-MT890525). Phylogenetic analyses are shown in Fig. 2 and Additional file 4: Fig. S2.

Discussion
Molecular studies on I. canisuga and I. kaiseri have been reported mostly from Europe, where these tick species typically infest Eurasian badgers (Meles meles), red foxes (Vulpes vulpes), steppe polecats (Mustela eversmanni), raccoon dogs (Nyctereutes procyonoides), hedgehogs (Erinaceus europaeus) and domestic dogs. Among these, dogs and red foxes can also be co-infested with I. canisuga and I. kaiseri [17,34]. In this study, I. canisuga and I. kaiseri were found on red foxes, as also confirmed by 16S rRNA gene sequences (GenBank: MT889694-MT889698 and MT889701-MT889705). To the best of our knowledge, I. canisuga and I. kaiseri have been discovered here for the first time on red foxes in China. Phylogenetic analysis of the COI gene showed that (i) I. canisuga specimens collected from the same host species (red fox) were genetically different between China (MT890495-MT890498) and Germany (KY962044-KY962045), Croatia (KY962037-KY962040), Bosnia-Herzegovina (KY962016-KY962017), Serbia (KY962030-KY962031) and Romania (KY962025, KY962021-KY962023); (ii) I. kaiseri from red foxes and long-tailed ground squirrels in the XUAR had 100% identity, but clustered in a separate phylogenetic position compared to European ticks; and (iii) Ha. erinacei infesting the red fox and marbled polecat in the XUAR shared identical COI gene sequences (MT890493 and MT890494), but differed from those collected in Italy, Turkey and Romania (Fig. 1c). These findings support the contention that the genetic diversity of I. kaiseri, I. canisuga and Ha. erinacei might reflect geographic distribution rather than host associations, consistent with Klompen et al. [35].
In previous reports, R. helvetica was detected in the blood sample of a red fox in Switzerland [36]. In addition, R. raoultii and Candidatus R. barbariae were reported in a marbled polecat in Altaw City, the XUAR [13]. R. raoultii was also found in the tissues of bats (Pipistrellus pipistrellus) [26]. Here, R. raoultii was detected for the first time Moreover, the DNA of R. raoultii was shown to be present in I. canisuga. Previously, R. raoultii has been detected in at least 15 [13,18,20,27,30,[37][38][39][40][41][42][43][44] [22,[45][46][47][48][49]. Based on the above findings, the epidemiological role of red foxes, marbled polecats and their ticks in maintaining and transmitting rickettsiae can be suggested. However, further studies (including those on experimental transmission) are likely required to verify this hypothesis. In addition, the scope of this work should be extended to more wildlife species from China and Central Asia to better understand the epidemiological implications among rickettsial species and wildlife.

Conclusions
To our knowledge, I. canisuga and I. kaiseri have not been previously identified from red foxes in China. The genetic diversity of I. kaiseri, I. canisuga and Ha. erinacei might be related to their geographic distribution rather than parasitized hosts. The results include the first detection of R. raoultii in I. canisuga and in red fox. We also provide the first molecular evidence of R. sibirica in red fox and marbled polecat. Our findings expand the range of tick-borne pathogens in wildlife species and associated ticks.
Additional file 2. Nested PCR protocol for the detection of rickettsiae in 13 wild carnivores as well as from their ticks, northern Xinjiang, China.
Additional file 3. The morphological characteristics of ticks from 12 red foxes and a marble polecat in northwestern China.