Microsatellite locus | Oligonucleotide name | Sequence (5′- 3’) | Annealing temperature (°C) | PCR product size (bp) | Reference |
---|---|---|---|---|---|
Str-15 | Str15FAM | TGCAGGCAGACGGATCAGGC | 60 | 220-226 | [41] |
Str15R | AATCCTCTACGTAAGGGATTTGC | ||||
Str-60 | Str60FAM | CGGTGTGCTTGTCAGGTTTC | 60 | 94-104 | [41] |
Str60R | GTCAAGTCAGCAAGCCTCAC | ||||
Str-543 | Str543NED | ATTCTTCGGCTTTCTCTTGC | 55 | 118-152 | [42] |
Str543R | ATCTGGTCAGTTTCTTTATG | ||||
SsoSL-417 | SsoSL417HEX | TTGTTCAGTGTATATGTGTCCCAT | 55 | 160-192 | [43] |
SsoSL417R | GATCTTCACTGCCACCTTATGACC | ||||
SsoSL-438 | SsoSL438FAM | GACAACACACAACCAAGGCAC | 55 | 98-108 | [43] |
SsoSL438R | TTATGCTAGGTCTTTATGCATTGT | ||||
Ssa-85 | Ssa85NED | AGGTGGGTCCTCCAAGCTAC | 60 | 104-116 | [44] |
Ssa85R | ACCCGCTCCTCACTTAATC | ||||
Ssa-197 | Ssa197HEX | GGGTTGAGTAGGGAGGCTTG | 60 | 128-158 | [44] |
Ssa197R | TGGCAGGGATTTGACATAAC | ||||
OKI-10 | OKI10FAM | GGAGTGCTGGACAGATTGG | 55 | 104-220 | [45] |
OKI10R | CAGCTTTTTACAAATCCTCCT |