Multi-omics data elucidate parasite-host-microbiota interactions and resistance to Haemonchus contortus in sheep

Niciura, Simone Cristina Méo; Cardoso, Tainã Figueiredo; Ibelli, Adriana Mercia Guaratini; Okino, Cintia Hiromi; Andrade, Bruno Gabriel; Benavides, Magda Vieira; Chagas, Ana Carolina de Souza; Esteves, Sergio Novita; Minho, Alessandro Pelegrine; Regitano, Luciana Correia de Almeida; Gondro, Cedric

doi:10.1186/s13071-024-06205-9

Table 1 Mean and standard deviation of eggs per gram (EPG) during Haemonchus contortus challenges in Morada Nova lambs

From: Multi-omics data elucidate parasite-host-microbiota interactions and resistance to Haemonchus contortus in sheep

ID	Sex	Sire	Dam	Days at the first challenge					Days at the second challenge					Mean	SD	Rank
				0	21	28	35	42	0	21	28	35	42
819	F	3	210	0	0	0	0	0	0	0	0	0	100	10	32	R
783	F	1	166	0	0	0	50	0	0	0	0	0	100	15	34	R
886	F	3	401	0	0	0	50	50	0	50	0	0	0	15	24	R
803	F	3	370	0	0	0	0	0	0	0	0	50	100	15	34	R
795	F	4	230	0	50	0	0	100	0	0	50			25	38	R
836^a	F	1	289	0	50	0	0	150	100	0	100	150	200	75	75	R
897^a	F	2	489	0	100	100	50	0	0	200	350	50	0	85	113	R
893	F	2	389	0	100	0	1000	350	0	0	50	0	0	150	318	R
883^a	F	4	532	50	0	200	100	100	50	100	250	450	600	190	194	R
949	F	4	439	0	0	0	0	0	0	50	0	100	2100	225	660	R
818^a	M	3	210	0	0	0	100	550	0	50	850	700	0	225	337	R
805	F	1	283	0	100	50	900	400	0	0	50	700	500	270	333	R
732^a	F	1	382	0	0	250	1850	1450	50	0	0	450	50	410	676	R
762	M	4	7	150	0	800	150	2850	0	50	250	550	650	545	858	R
891	M	1	249	0	100	350	2950	2600	500	400	100	300	650	795	1065	R
988	M	3	333	200	400	1050	1950	2450	350	50	150	1500	500	860	841	R
789	M	4	177	0	100	150	600	1300	50	350	2100	2700	2200	955	1034	R
917	M	4	254	200	100	900	3100	1800	550	1000	1950	800	500	1090	932	R
797	M	3	403	0	300	350	700	3000	2000	1700	850	600	2100	1160	979	R
918	M	4	508	0	1750	4700	2750	100	350	1550	800	900	1400	1430	1422	R
894	M	2	389	150	400	3250	5600	4200	400	500	1600	700	850	1765	1908	R
906	F	2	503	100	700	5350	9400	11,300	600	3200	2250	1500	1050	3545	3923	S
944	F	2	542	150	2950	7850	17,300	8850	400	700	250	200	500	3915	5732	S
985	F	3	368	0	550	7950	21,750	26,450	1600	0	0	100	1200	5960	9916	S
921	M	2	122	50	8000	12,500	12,500	7400	1400	6350	1200	5800	6100	6130	4347	S
898	M	2	431	50	14,800	17,100	12,000	16,650	650	1200	1000	800	400	6465	7589	S
740	F	3	349	50	1450	9100	6200	4000	0	3350	15,700	13,200	11,950	6500	5692	S
1038	F	3	252	50	7500	12,100	18,300	19,350	400	500	700	3550	3800	6625	7461	S
907	M	3	415	400	10,450	13,000	12,100	3850	650	4100	2550	900	18,400	6640	6340	S
756	F	3	527	0	15,000	14,550	100	100	0	2650	14,000	15,600	13,000	7500	7376	S
852^a	M	1	391	100	3500	19,000	20,000	22,000	0	3000	1100	8700	2750	8015	8871	S
739	M	3	349	50	3700	26,250	10,550	6200	150	3350	9000	9700	14,200	8315	7811	S
1053^a	F	1	299	0	5400	6550	18,750	33,550	350	500	4000	4950	9500	8355	10,447	S
718	M	1	252	0	3150	12,700	14,950	10,600	50	4700	12,450	6500	20,700	8580	6821	S
923^a	F	1	223	0	8800	11,700	15,850	10,200	600	5150	13,600	8000	12,300	8620	5309	S
742	M	1	401	0	50	12,100	10,550	25,100	0	1450	13,050	8350	20,000	9065	8870	S
727	M	1	184	50	100	7350	7350	9200	0	4100	10,500	25,000	37,200	10,085	12,072	S
1013^a	M	3	509	300	6000	21,200	20,500	35,000	9150	1500	3300	9800	7400	11,415	10,931	S
858	F	4	387	50	10,450	25,000	15,850	38,450	0	5450	8700	15,000	9000	12,795	11,729	S
863	F	4	282		7300	16,000	36,500	56,100	0	3000	3550	12,200	12,500	16,350	18,404	S
781^a	M	4	339	100	150	20,350	21,900	8900	0	11,000	36,500	45,950	31,100	17,595	16,361	S
1049	F	4	486	0	1400	12,400	34,450	44,200	5300	14,450	40,000	14,450		18,517	16,793	S
1052	M	4	296	300	16,000	28,100	46,150	49,300	9450	12,000	16,100	30,900	25,800	23,410	15,772	S
1048	M	4	382	50	16,250	22,600	39,500	42,500	7350	22,500	27,500	81,950		28,911	24,112	S

^a Animals selected for RNA-seq. ID animal identification, SD standard deviation, M male, F female, R resistant, S susceptible

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