Table 6 Significant functional co-expression modules of sheep RNA-seq genes and amplicon sequence variants (ASV)
Module | Number of features | Hubs |
|---|---|---|
M1 | Genes = 225; archaea feces = 3; archaea rumen = 5; bacteria feces = 27; bacteria rumen = 42 | LOC114116187 (CALHM6), CD8B, LOC114109611 (UBD), CD8A, LOC101122689 (TRGC1) |
M2 | Genes = 167; archaea rumen = 9; bacteria feces = 54; bacteria rumen = 54 | ASV_Bac_1273_R, ASV_Bac_422_S, CCDC150, ASV_Bac_396_R, HKDC1 |
M3 | Genes = 204; archaea feces = 1; archaea rumen = 4; bacteria feces = 16; bacteria rumen = 15 | SLC26A7, HRH2, TNNI3, KCNJ16, PPP1R1A |