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Table 1 Differentiation between Leishmania subgenera by SYBR Green melting temperatures (Tm) from amplified minicircles kDNA conserved region

From: SYBR Green-based Real-Time PCR targeting kinetoplast DNA can be used to discriminate between the main etiologic agents of Brazilian cutaneous and visceral leishmaniases

Source

Samples

Origin

Melting Temperature (°C ± SD)

Promastigote reference strains

L (V.) braziliensis (MHOM/BR/1975/M2903)

IOC/FIOCRUZ

77.34 ± 0.01

 

L (V.) shawi (MCEB/BR/1984/M8408)

IOC/FIOCRUZ

77.34 ± 0.01

 

L (V.) naiffi (MDAS/BR/1979/M5533)

IOC/FIOCRUZ

77.34 ± 0.01

 

L (V.) lainsoni (MHOM/BR/1981/M6426)

IOC/FIOCRUZ

77.37 ± 0.01

 

L (V.) guyanensis (MHOM/BR/1975/M4147)

IOC/FIOCRUZ

77.39 ± 0.01

 

L (L.) infantum (Syn. L. chagasi) (MHOM/BR/1974/PP75)

IOC/FIOCRUZ

78.95 ± 0.01

 

L (L.) amazonensis (MHOM/BR/1977/LTB0016)

IOC/FIOCRUZ

78.94 ± 0.00

Human clinical specimens

Cutaneous leishmaniasis (skin biopsies)

Rio de Janeiro/RJ

77.68 ± 0.38

 

Visceral leishmaniasis (peripheral blood and bone marrow aspirates)

Campo Grande/MS

78.94 ± 0.37

Field sand flies

Lutzomyia intermedia

Rio de Janeiro/RJ

77.25 ± 0.15

 

Lutzomyia migonei

Rio de Janeiro/RJ

77.25 ± 0.15

 

Lutzomyia cruzi

CorumbĂ¡/MS

78.98 ± 0.10

 

Lutzomyia forattini

CorumbĂ¡/MS

78.98 ± 0.10

  1. IOC: Oswaldo Cruz Institute, FIOCRUZ: Oswaldo Cruz Foundation, RJ: State of Rio de Janeiro, MS: State of Mato Grosso do Sul, SD: standard deviation
  2. The melting temperatures of kDNA amplified products were analyzed from samples obtained from Leishmania promastigotes reference strains, clinical specimens from cutaneous and visceral leishmaniases patients and field-captured phlebotomine insects. The dissociation curves analyses revealed distinct melting temperatures between the subgenera Viannia and Leishmania (p < 0.001 - Mann-Whitney Rank Sum Test).