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Table 6 The 50 most abundant SAGE tags in the pooled tag data from control LongSAGE library

From: The ovarian transcriptome of the cattle tick, Rhipicephalus (Boophilus) microplus, feeding upon a bovine host infected with Babesia bovis

Rank

Taga

Count

Infected

BmiGI match

Library rank

Description

Species

e-value

ID

1

ACGTGACTGTCGCCACC

57

29

-

-

-

-

2

TGGTGCCCGAAACGAAG

55

106

Uro-adherence factor A

Taloromyces stipitatus

1e-05

TC12322

3

TGGCTGGCTGCCCACTG

48

18

Ribosomal protein P0

Haemaphysalis longicornis

2e-35

TC9039

4

GACGGCGAGTGGGAACC

45

116

calreticulin

Rhipicephalus microplus

1e-165

TC8950

5

TACGAAGCGCTGGCAGA

43

49

Disulfide isomerase

Haemaphysalis longicornis

4e-48

TC8716

6

ACGCGACTGTCGCCACC

40

29

Putative secreted protein

Ixodes scapularis

3e-72

TC5798

7

TCTGGACGCGGCAAGGG

38

425

-

-

 

-

8

GCCCGCAGCGGCTGAAC

35

50

Hypothetical protein

Ixodes scapularis

2e-10

TC7866

9

CTCACCGACCCGTCGGC

35

43

-

-

-

-

10

GGTCCACCCCAGCGACT

33

31

Hypothetical protein

Ixodes scapularis

8e-104

TC12372

11

CGCAAGGCCCAAGGAGG

29

260

Hypothetical protein

Ixodes scapularis

1e-20

TC9377

12

CGCAAGGCCCAAGGAGG

29

50

-

-

-

-

13

GTGGTGCACGCCAACCC

28

80

Superoxide dismutase-

Apis mellifera

8e-44

TC12062

14

CCAGCGCTAAAGATGCG

27

59

-

-

-

-

15

GAGGCGGTGCGGGAGAG

27

178

-

-

-

-

16

GCACGGCGATGCGACGG

26

39

-

-

-

-

17

TGTGGCTGGGGCTCCGC

26

50

-

-

-

-

18

GACTCCAATGAAGGCCC

25

25

Alpha tubulin

Mus musculus

0.0

TC9399

19

ACACGACTGTCGCCACC

23

116

-

-

-

-

20

GCGAGGAGCTTGTCGGG

22

35

-

-

-

-

21

GCTGTGGTTGCGCGCAC

22

59

-

-

-

-

22

CTGCAGACGTTGACGGG

21

97

Adipose differentiation related protein

Ixodes scapularis

8e-75

TC9098

23

GGCCCCCTCCCGCCCAA

21

Nob

Transaldolase

Macaca mulatta

5e-57

TC13335

24

TGCGCAAAGGACGCCCG

21

178

Serine proteinase inhibitor

Rhipicephalus microplus

1e-26

BEAET94TR

25

ATCTGAGTTTAGACCGA

21

1

Mitochondrial DNA

Rhipicephalus sanguineus

0.00

TC5761

26

CTGAGGATTGCCGAGCC

20

97

60S ribosomal protein L7

Argas monolakensis

1e-104

TC5935

27

CACGTACAACCTCTGCG

19

No

-

-

-

-

28

GGGGAGTCTGACGACTG

19

80

-

-

-

-

29

GGCGACCGCTTCACCGA

19

68

Myosin regulatory light chain

 

5e-83

TC12444

30

TTGTGCAGCGATCGGCA

19

425

-

-

-

-

31

GCACCTGGCGCTGGCAA

18

260

-

-

-

-

32

CTGGCCGCTTGGGTCCG

18

116

-

-

-

-

33

GTAGGCCCGGTATTGGT

17

18

-

-

-

-

34

CACCTTTGCATCGACGC

15

68

-

-

-

-

35

GTACCAGAGGACAAGCC

15

967

-

-

-

-

36

GGAAGCGCTAAGCGGCC

14

50

-

-

-

-

37

GAGGCACAGGCGCCGAA

14

143

60S ribosomal protein L13e

Amblyomma americanum

3e-85

TC12299

38

TCTGTGCGTGCCAAGGA

14

116

60S ribosomal protein L10

Ixodes scapularis

2e-48

TC8894

39

GTCAGCTGATGGGCAGA

14

178

G nucleotide binding protein

Dermacentor variabilis

2e-167

TC6908

40

CAAATCTCTGCGTGGCA

13

260

Translation initiation factor 2C

Ixodes scapularis

4e-27

TC6114

41

GCCTGCGTTTGCTGCAG

13

143

Nucleolysin RNA binding protein

Pediculus humanus corporis

2e-122

TC12242

42

TTGCGGCTGCGCCGCAC

13

260

Golgi protein involved in ER retention

Ixodes scapularis

2e-81

TC12211

43

GTTTGTGAGAGCGCCGC

13

260

-

-

-

-

44

CCCGCGGTCATCACGGA

13

143

-

-

-

-

45

AAGGCGCCAGCGGTGAT

13

68

-

-

-

-

46

GCCGCACACTTTGACAG

12

97

Ubiquitin/ribosomal protein S27A

Dermacentor variabilis

1e-61

TC10071

47

GGTTGGGCGCCGACGCG

12

178

Ubiquitin protein ligase

Ixodes scapularis

1e-76

BEABI57TR

48

GCGTTTGCTGGTGCCAG

12

178

Maleate dehydrogenase

Ixodes scapularis

2e-164

TC9744

49

TGGTGGTAGCTGGTGCG

12

14

-

-

-

-

50

GTGGTGCCGTCGGCGCT

12

260

-

-

-

-

  1. a CATG trimmed from each tag’s 5′ end for clarity.
  2. b Indicates tag not found in Infected library.
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ISSN: 1756-3305

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