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Table 6 Nucleotide homologies of partial 56-kDa TSA gene between Orientia tsutsugamushi strains

From: Molecular epidemiology of Orientia tsutsugamushi in chiggers and ticks from domestic rodents in Shandong, northern China

Reference strain Homologies (%)
  TAM1 TAM2 TAM3 TAM5 YNM1 YNM2 YNM5 TAT1
Kawasaki 69.8 96.4 96.4 96.5 96.5 96.5 96.5 96.5
Shimokoshi 99.4 70.4 70.4 70.4 70.4 70.4 70.4 70.4
Shandong-XDM2 71.2 99.9 99.9 100 100 100 100 100
CHL 70.7 99.9 99.9 100 100 100 100 100
ZQL 70.5 99.9 99.9 99.7 99.7 99.7 99.7 99.7
ZZF 70.7 100 100 99.9 99.9 99.9 99.9 99.9
TADY12-0305 70.3 99.6 99.6 99.4 99.4 99.4 99.4 99.4
TADY12-0307 70.4 99.6 99.6 99.4 99.4 99.4 99.4 99.4
YN11-24 70.5 99.9 99.9 99.7 99.7 99.7 99.7 99.7
TAXT11-1023 70.7 100 100 99.9 99.9 99.9 99.9 99.9
STAD10-24 70.7 100 100 99.9 99.9 99.9 99.9 99.9
STAD10-792 69.6 76.4 76.4 76.4 76.4 76.4 76.4 76.4
TAXT11-1103 69.6 76.4 76.4 76.4 76.4 76.4 76.4 76.4
TADY11-1168 75.7 70.0 70.0 70.0 70.0 70.0 70.0 70.0