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Table 4 Codon usage of Spirocerca lupi mitochondrial protein-coding genes

From: Characterization of the complete mitochondrial genome of Spirocerca lupi: sequence, gene organization and phylogenetic implications

Amino acid Codon Number Frequency (%) Amino acid Codon Number Frequency (%)
Phe TTT 591 17.03 Met ATA 52 1.49
Phe TTC 16 0.46 Met ATG 103 2.96
Leu TTA 195 5.61 Thr ACT 81 2.33
Leu TTG 235 6.77 Thr ACC 3 0.08
Ser TCT 139 4.00 Thr ACA 2 0.05
Ser TCC 7 0.20 Thr ACG 3 0.08
Ser TCA 8 0.23 Asn AAT 87 2.50
Ser TCG 6 0.17 Asn AAC 6 0.17
Tyr TAT 214 6.16 Lys AAA 42 1.21
Tyr TAC 6 0.17 Lys AAG 56 1.61
Stop TAA 7 0.20 Ser AGT 99 2.85
Stop TAG 5 0.14 Ser AGC 5 0.14
Cys TGT 75 2.16 Ser AGA 22 0.63
Cys TGC 3 0.08 Ser AGG 30 0.86
Trp TGA 36 1.03 Val GTT 239 6.88
Trp TGG 56 1.61 Val GTC 5 0.14
Leu CTT 19 0.54 Val GTA 35 1.00
Leu CTC 0 0 Val GTG 37 1.06
Leu CTA 10 0.28 Ala GCT 64 1.84
Leu CTG 2 0.05 Ala GCC 4 0.11
Pro CCT 55 1.58 Ala GCA 1 0.02
Pro CCC 7 0.20 Ala GCG 10 0.28
Pro CCA 6 0.17 Asp GAT 66 1.90
Pro CCG 9 0.25 Asp GAC 2 0.05
His CAT 52 1.49 Glu GAA 31 0.89
His CAC 1 0.02 Glu GAG 42 1.21
Gln CAA 20 0.57 Gly GGT 143 4.12
Gln CAG 31 0.89 Gly GGC 12 0.34
Arg CGT 46 1.32 Gly GGA 33 0.95
Arg CGC 1 0.02 Gly GGG 72 2.07
Arg CGA 3 0.08 IIe ATT 212 6.10
Arg CGG 6 0.17 IIe ATC 4 0.11
  1. Total number of codons is 3,470.
  2. Stop = Stop codon.