Marker | T a | Duplex mix | Post-PCR dilution | Dye | A | Allele sizes (bp) | Citation and/or primer sequence (5’-3’) |
---|---|---|---|---|---|---|---|
PNC75 | 64 | 2 | 1/40 | NED | 4 | 139, 143, 145, 147 | [28] |
PNC98 | 55 | 3 | 1/10 | NED | 4 | 135, 139, 141, 143 | [28] |
PNC153 | 48 | naa | 1/15 | VIC | 16 | 132, 136, 140, 144, 148, 152, 156, 160, 164, 172, 176, 180, 184, 188, 192, 196 | [28] but redesigned R primer (PNC153-R2): TTCAAAGTTCATATGCATGGTC |
BmC07 | 57 | 1 | 1/100 | NED | 8 | 132, 142, 158, 170, 172, 178, 190, 192 | [29] but redesigned R primer (BmC07-R2); GTCAGCCATATGTTCAACCAGA |
BmD10 | 57 | 1 | 1/100 | 6FAM | 2 | 152, 154 | [29] |
BmB12 | 67 | naa | 1/60 | 6FAM | 2 | 297, 301 | [29] but redesigned R primer (BmB12-R2): CGTATGAAGCTATGATGAATAGGAGACGTG |
LTF4.3 | 48 | naa | 1/15 | PET | 3 | 295, 297, 319 | [30] |
SJB411 | 55 | 3 | 1/10 | 6FAM | 19 | 159, 187, 191, 195, 215, 219, 223, 227, 231, 239, 243, 251, 259, 263, 267, 271, 275, 279, 283 | [30] |
KRGinv | 55 | na | na | VIC | 20 | 138, 142, 146, 150, 154, 158, 162, 166, 170, 174, 210, 246, 252, 256, 258, 262, 266, 270, 274, 278 | [30] Removed from study. |
ATC12 | 64 | 2 | 1/40 | PET | 12 | 137, 143, 155, 158, 161, 164, 167, 170, 173, 176, 179, 182 | [26] F-CAAGCACAGGACCGAGTTGA |
[26] R-GTGTGCTTTCGCAATGATCG | |||||||
ATC15 | 56 | 4 | 1/30 | PET | 4 | 187, 205, 208, 211 | [26] F-AAAGATTCATGAAGGATGTTGATCG |
[26] R-GCCTACAAATTCAACTGAGGGAAAA | |||||||
ATT20 | 56 | 4 | 1/30 | 6FAM | 25 | 190, 226, 229, 232, 235, 238, 241, 244, 247, 250, 253, 256, 259, 262, 265, 268, 271, 274, 277, 280, 283, 286, 289, 292, 295 | [26] F-CGGTTAATCTACAAACGAAGTCTTG |
[26] R-TTTTTATGTAGTGCTTTTTCAACTTTCA |