microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach

Parasites & Vectors

Table 1 Summary of sequenced Echinococcus canadensis G7 and Echinococcus granulosus sensu stricto G1 small RNA libraries

Sample type ^a	Biological replicate	Raw reads	Clean reads	Number of mapped reads	Number of unique mapped reads	Percentage of mapped reads (%)
CWG7	1	3478621	2487372	1296835	181581	52.13
CWG7	2	2595548	2117367	964013	129557	45.52
PSG7	1	5336595	4065356	3292446	340876	80.98
PSG7	2	2596358	1882945	1655705	144788	87.93
PSG1	1	1952674	1642112	1302664	157098	79.32
PSG1	2	3108663	1956161	1674196	202776	85.58
Total		19068459	14151313	10185859	1156676	71.91^b

^aCWG7: E. canadensis G7 cyst wall, PSG7: E. canadensis G7 protoscoleces, PSG1: E. granulosus s. s. G1 protoscoleces.
^bAverage percentage of mapped reads from all samples.

ISSN: 1756-3305