Table 1 Species used as control, host and parasite references for protein identification
From: Identification of candidate mimicry proteins involved in parasite-driven phenotypic changes
Species | Common name | Phylum (class) | Source |
|---|---|---|---|
Host | |||
Gasterosteus aculeatus | Threespine stickleback | Chordata (Actinopterygii) | Ensembl |
Non-host control fishes | |||
Xiphophorus maculatus | Platyfish | Chordata (Actinopterygii) | Ensembl |
Oryzias latipes | Medaka | Chordata (Actinopterygii) | Ensembl |
Lepisosteus oculatus | Spotted gar | Chordata (Actinopterygii) | Ensembl |
Takifugu rubripes | Japanese puffer | Chordata (Actinopterygii) | Ensembl |
Parasites | |||
Brugia malayi | Filarial nematode | Nematoda (Onchocercidae) | Uniprot |
Cryptosporidium parvum | --- | Apicomplexa (Conoidasida) | CryptoDB |
Echinococcus granulosus | Dog tapeworm | Plathelminthes (Cestoda) | Sanger |
Echinococcus multilocularis | Fox tapeworm | Plathelminthes (Cestoda) | Sanger |
Giardia lamblia | --- | Metamonada (Eopharyngia) | GiardiaDB |
Hymenolepis microstoma | Rodent tapeworm | Plathelminthes (Cestoda) | Sanger |
Leishmania major | --- | Euglenoza (Kinetoplastidia) | TritrypDB |
Plasmodium falciparum | Malaria | Apicomplexa (Aconoidasida) | PlasmoDB |
Schistosoma mansoni | Blood fluke | Plathelminthes (Trematoda) | Sanger |
Trypanosoma cruzi | Chagas | Euglenoza (Kinetoplastidia) | TritrypDB |
Taenia solium | Pork tapeworm | Plathelminthes (Cestoda) | GeneDB |
Trichomonas vaginalis | --- | Metamonada (Parabasalia) | Uniprot |
Controls | |||
Anopheles gambiae | African malaria mosquito | Arthropoda (Culicidae) | Vectorbase |
Arabidopsis thaliana | Mouse-ear cress, thale cress | Magnoliophyta (Magnoliopsida) | EBI |
Caenorhabditis elegans | “Roundworm” | Nematoda (Chromadorea) | Wormbase |
Ciona intestinalis | Vase tunicate, Sea squirt | Chordata (Ascidiacea) | JGI |
Schizosaccharomyces pombe | Fission yeast | Ascomycota (Schizosaccharomycetes) | EBI |
Capitella teleta | --- | Annelida (Polychaeta) | Ensembl |
Trichoplax adaherens | --- | Placozoa (Tricoplacia) | Uniprot |