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Table 3 The cox1 (CO1-Ha) and nad1 (ND1-Ha) haplotypes identified for Fascioloides magna from North American localities

From: Genetic interrelationships of North American populations of giant liver fluke Fascioloides magna

Country/province, state cox1 haplotype code GenBank Acc. no. No. of specimens nad1 haplotype code GenBank Acc. no. No. of specimens
CO1-Ha freq. - % ND1-Ha freq. - %
Canada/Alberta (AB) CO1-Ha1/AB GU599861a 95 → 38.3 (Ha1) ND1-Ha3/AB GU599845a 90 → 39.6 (Ha3)
  CO1-Ha6/AB GU599871a 26 → 10.5 (Ha6) ND1-Ha8/AB GU599846a 11 → 4.8 (Ha8)
Canada/British CO1-Ha1/BC KP635011   ND1-Ha3/BC KP635037  
Columbia (BC) CO1-Ha20/BC KP635012 3 → 1.2 (Ha20) ND1-Ha24/BC KP635038 6 → 2.6 (Ha24)
  CO1-Ha21/BC KP635013 5 → 2.0 (Ha21) ND1-Ha25/BC KP635039 3 → 1.3 (Ha25)
     ND1-Ha30/BC KP635040 1 → 0.4 (Ha30)
Canada/Northern CO1-Ha9/NL/QC KP635014, KP635017 14 → 5.6 (Ha9) ND1-Ha12/QC KP635041 11 → 4.8 (Ha12)
Quebec (QC) and CO1-Ha17NL/QC KP635015, KP635018 10 → 4.0 (Ha17) ND1-Ha19/QC/NL KP635042, KP635047 25 → 11.0 (Ha19)
Labrador (NL) CO1-Ha18/NL KP635016 1 → 0.4 (Ha18) ND1-Ha20/QC/NL KP635043, KP635048 6 → 2.6 (Ha20)
  CO1-Ha22/QC KP635019 5 → 2.0 (Ha22) ND1-Ha21/QC KP635044 2 → 0.9 (Ha21)
  CO1-Ha28/QC KP635020 2 → 0.8 (Ha28) ND1-Ha22/QC/NL KP635045, KP635049 4 → 1.8 (Ha22)
     ND1-Ha23/QC KP635046 1 → 0.4 (Ha23)
USA/Oregon (OR) CO1-Ha1/OR GU599862a   ND1-Ha3/OR GU599848a  
USA/Minnesota (MN) CO1-Ha8/MN GU599873a 13 → 5.2 (Ha8) ND1-Ha9/MN GU599849a 7 → 3.1 (Ha9)
  CO1-Ha9/MN GU599874a   ND1-Ha10/MN GU599850a 12 → 5.3 (Ha10)
  CO1-Ha10/MN GU599875a 4 → 1.6 (Ha10) ND1-Ha11/MN GU599851a 2 → 0.9 (Ha11)
  CO1-Ha11/MN GU599876a 3 → 1.2 (Ha11) ND1-Ha12/MN GU599852a  
  CO1-Ha19/MN KP635021 1 → 0.4 (Ha19) ND1-Ha32/MN KP635050 1 → 0.4 (Ha32)
USA/Mississippi (MS) CO1-Ha9/MS KP635022   ND1-Ha12/MS KP635051  
  CO1-Ha12/MS GU599877a 2 → 0.8 (Ha12) ND1-Ha15/MS GU599855a 2 → 0.9 (Ha15)
  CO1-Ha13/MS GU599878a 1 → 0.4 (Ha13) ND1-Ha16/MS GU599856a 2 → 0.9 (Ha16)
  CO1-Ha14/MS GU599879a 1 → 0.4 (Ha14) ND1-Ha17/MS GU599857a 5 → 2.2 (Ha17)
  CO1-Ha15/MS GU599880a 3 → 1.2 (Ha15)    
USA/Florida (FL) CO1-Ha16/FL GU599882a 22 → 8.9 (Ha16) ND1-Ha13/FL GU599853a 15 → 6.6 (Ha13)
     ND1-Ha14/FL GU599854a 2 → 0.9 (Ha14)
     ND1-Ha27/FL KP635052 3 → 1.3 (Ha27)
     ND1-Ha28/FL KP635053 2 → 0.9 (Ha28)
USA/Georgia (GA) CO1-Ha7/GA GU599872a 1 → 0.4 (Ha7) ND1-Ha9/GA GU599847a  
  CO1-Ha16/GA KP635023   ND1-Ha13/GA KP635054  
USA/Louisiana (LA) CO1-Ha15/LA GU599881a   ND1-Ha10/LA KP635055  
  CO1-Ha29/LA KP635024 1 → 0.4 (Ha29) ND1-Ha12/LA KP635056  
  CO1-Ha30/LA KP635025 1 → 0.4 (Ha30) ND1-Ha16/LA GU599858a  
  CO1-Ha31/LA KP635026 1 → 0.4 (Ha31) ND1-Ha17/LA KP635057  
  CO1-Ha32/LA KP635027 1 → 0.4 (Ha32) ND1-Ha18/LA GU599859a 2 → 0.9 (Ha18)
  CO1-Ha33/LA KP635028 2 → 0.8 (Ha33)    
  CO1-Ha34/LA KP635029 1 → 0.4 (Ha34)    
USA/South Carolina (SC) CO1-Ha3/SC KP635030 7 → 2.8 (Ha3) ND1-Ha4/SC KP635058 2 → 0.9 (Ha4)
  CO1-Ha23/SC KP635031 16 → 6.5 (Ha23) ND1-Ha6/SC KP635059 5 → 2.2 (Ha6)
  CO1-Ha24/SC KP635032 1 → 0.4 (Ha24) ND1-Ha19/SC KP635060  
  CO1-Ha25/SC KP635033 1 → 0.4 (Ha25) ND1-Ha26/SC KP635061 1 → 0.4 (Ha26)
  CO1-Ha26/SC KP635034 1 → 0.4 (Ha26) ND1-Ha29/SC KP635062 3 → 1.3 (Ha29)
  CO1-Ha27/SC KP635035 2 → 0.8 (Ha27) ND1-Ha31/SC KP635063 1 → 0.4 (Ha31)
  CO1-Ha35/SC KP635036 1 → 0.4 (Ha35)    
  1. Frequency (freq.) of haplotypes were calculated for all individuals having the respective Ha despite of their locality; numbering of haplotypes follows that of Králová-Hromadová et al. [13], therefore Ha numbers of exclusively European populations are missing; adata published in Králová-Hromadová et al. [13]