Vector sequence contamination of the Plasmodium vivax sequence database in PlasmoDB and In silico correction of 26 parasite sequences

Table 1 Correction of 26 genes affected by a contaminated cloning vector sequence in PlasmoDB

ID	PlasmoDB ID	GenBank accession number	Length (bp)
ID	PlasmoDB ID	GenBank accession number	Before correction	After correction
1	PVX_253300	XM_001612328	1,086	945
2	PVX_250300	XM_001612323	1,047	906
3	PVX_211290^a	XM_001612311	945	807
4	PVX_226290^a	XM_001612298	792	741
5	PVX_214290^a	XM_001612318	861	792
6	PVX_215290^a	XM_001612317	861	793
7	PVX_220290	XM_001612333	654	513
8	PVX_252300	XM_001612332	1,149	1,008
9	PVX_222290^b	XM_001612349	1,233	1,098
10	PVX_196290^b	XM_001612337	1,173	1,101
11	PVX_195290	XM_001612373	1,893	1,752
12	PVX_231290	XM_001612334	639	498
13	PVX_213290	XM_001612274	513	441
14	PVX_249300	XM_001612331	1,113	972
15	PVX_227290	XM_001612370	1,902	1,761
16	PVX_240290^c	XM_001612308	942	801
17	PVX_235290^c	XM_001612320	717	576
18	PVX_254300	XM_001612327	1,062	921
19	PVX_200290^d	XM_001612305	921	876
20	PVX_201290^d	XM_001612303	828	780
21	PVX_206290^d	XM_001612319	924	876
22	PVX_208290^d	XM_001612329	1,017	876
23	PVX_216290^e	XM_001612279	711	570
24	PVX_218290^e	XM_001612281	711	570
25	PVX_237290^e	XM_001612314	711	570
26	PVX_217290^e	XM_001612282	621	570

ISSN: 1756-3305