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Table 1 Sample sizes (N/n), haplotype diversity (Hd), nucleotide diversity (pi) and number of haplotypes (h) based on COI, 16S rRNA and COI + 16S rRNA sequences of R. microplus populations in Malaysia

From: Molecular characterisation of the tick Rhipicephalus microplus in Malaysia: new insights into the cryptic diversity and distinct genetic assemblages throughout the world

Farm

N

n

COI

  

16S rRNA

  

COI + 16S rRNA

 
   

Hd

pi

h

Hd

Pi

h

Hd

pi

h

B

13

13

0.1539

0.0010

2

0.2821

0.0007

2

0.4103

0.0009

3 (H1,H13,H18)

C

106

33

0.6042

0.0023

5

0.1761

0.0005

4

0.6667

0.0016

8 (H1,H2,H10,H11,H12,H16,H17,H18)

D

14

14

0.6703

0.0296

5

0.0000

0.0000

1

0.6703

0.0016

5 (H1,H4,H5,H12,H17)

G

6

6

0.8000

0.0337

4

0.3333

0.0008

2

0.8000

0.0209

4 (H1,H5,H14,H17)

H

249

30

0.3632

0.0148

6

0.1862

0.0005

2

0.4644

0.0092

7 (H1,H3,H6,H7,H8,H9,H15)

Total

388

96

0.5123

0.0124

12

0.1787

0.0005

7

0.5875

0.0077

18 (H1-H18)

  1. N = number of ticks collected; n = number of ticks genotyped