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Table 1 Indices of population genetic diversity for Aedes aegypti in Yogyakarta, Indonesia

From: Aedes aegypti has spatially structured and seasonally stable populations in Yogyakarta, Indonesia

    Microsatellites nuclear SNPs mtDNA
Site Hamlet Life stage/season n Allelic richness H E F IS n H E F IS n π Hd
1 Kali Tirto L/wet 52 3.99 0.532 0.020 - - - - - -
   A/wet 21 3.87 0.506 0.138 - - - - - -
2 Banguntapan L/wet 79 4.54 0.614 0.069 - - - - - -
   L/dry 34 5.81 0.597 0.055 9 0.210 0.157 19 0.0009 0.713
   A/wet 27 5.31 0.607 −0.010 - - - - - -
3 Singosaren L/wet 23 4.44 0.560 0.132 - - - - - -
   L/dry 36 5.26 0.553 0.169 5 0.209 −0.011 15 0.0013 0.819
   A/wet 30 5.05 0.598 0.083 - - - - - -
4 Timbulharjo L/wet 16 3.81 0.569 0.005 - - - - - -
5 Patalan L/wet 17 4.25 0.549 0.164 - - - - - -
   A/wet 23 4.64 0.547 0.035 - - - - - -
6 Nogotirto L/wet 34 4.13 0.583 0.044 10 0.205 0.077 6 0.0044 0.800
   L/dry 37 5.14 0.593 0.073 12 0.207 0.051 9 0.0012 0.694
   A/wet 27 4.30 0.522 0.030 - - - - - -
7 Trihanggo L/wet 46 3.89 0.522 0.055 16 0.214 0.051 10 0.0012 0.533
   L/dry 36 5.17 0.523 0.035 12 0.217 0.107 9 0.0007 0.250
8 Trihanggo L/wet 30 3.86 0.547 0.085 20 0.227 0.119 8 0.0013 0.464
   L/dry 34 5.47 0.555 0.065 20 0.221 0.143 8 0.0016 0.667
9 Pandowo Harjo L/wet 10 4.00 0.561 0.135 - - - - - -
10 Widodo Martani L/wet 18 3.82 0.559 0.024 - - - - - -
   A/dry 24 3.98 0.548 0.029 - - - - - -
11 Cokrodiningratan L/dry 40 5.54 0.538 −0.005 19 0.226 0.094 9 0.0021 0.972
12 Tegal Panggung L/dry 40 5.47 0.543 0.039 20 0.227 0.102 13 0.0005 0.641
13 Mantrijeron L/dry 40 5.44 0.574 0.025 20 0.230 0.127 17 0.0004 0.721
  1. Indices for microsatellites, nuclear-genome wide SNPs and mitochondrial DNA sequences. n sample size, L larvae, A adults, season: wet and dry; H E expected heterozygosity, F IS inbreeding/fixation index, π nucleotide diversity, H d haplotype diversity