Fig. 4
From: Molecular characterization of a cathepsin F-like protease in Trichinella spiralis
Stereo view of the interactions between TsCF1 (silver) and E64 (green), K11777 (yellow). Surface representation of the pocket of TsCF1, ligand displayed with sticks. a Binding mode of E64 and interactions between E64 and TsCF1. a and b represent the key interactions between TsCF1 and E64, surface representation of modeled TsCF1 active pocket, and inhibitor E64 are shown in green bonds. c Hydrophobic interactions between TsCF1 and E64. (a and b was created with VMD1.9.1, and c was created with LigPlot v.1.4.5) (color figure online). b Binding mode of K11777 and interactions between K11777 and TsCF1. a Key interactions between TsCF1 and K11777, surface representation of modeled TsCF1 active pocket, and K11777 are shown in yellow bonds. b Hydrophobic interactions between TsCF1 and K11777. (a was created with VMD1.9.1, and b was created with LigPlot v.1.4.5) (color figure online)