The genetic diversity and geographical separation study of Oncomelania hupensis populations in mainland China using microsatellite loci

Guan, Wei; Li, Shi-Zhu; Abe, Eniola Michael; Webster, Bonnie L.; Rollinson, David; Zhou, Xiao-Nong

doi:10.1186/s13071-016-1321-z

Table 3 Coefficients of genetic diversity of O. hupensis at different loci (the populations of landscape of swamps and lakes)

From: The genetic diversity and geographical separation study of Oncomelania hupensis populations in mainland China using microsatellite loci

Populations	Index	Microsatellite loci								Total
Populations	Index	T1-10	T4-25	D11	T4-22	T5-11	T6-27	A18	C22	Total
AHNG	Na	13	12	7	8	14	9	11	10	10.500
	He	0.863	0.815	0.806	0.774	0.927*	0.847*	0.929*	0.941*	0.863
	Ho	0.412	0.706	0.188	0.706	0.882	0.588	0.071	0.222	0.472
	PIC	0.948	0.938	0.913	0.902	0.927	0.932	0.948	0.949	0.932
AHWJ	Na	13	15	4	2	8	6	8	1	7.125
	He	0.918*	0.936	0.406	0.258	0.749	0.549	0.777	0.000	0.574
	Ho	0.588	0.471	0.000	0.059	0.765	0.133	0.200	0.104	0.317
	PIC	0.967	0.927	0.987	0.923	0.937	0.927	0.914	0.972	0.944
AHWW	Na	6	21	9	10	11	10	15	17	12.375
	He	0.810	0.963*	0.856	0.860	0.898	0.849	0.914*	0.936	0.886
	Ho	0.091	0.444	0.353	0.278	0.389	0.611	0.412	0.647	0.403
	PIC	0.943	0.923	0.938	0.912	0.924	0.972	0.916	0.976	0.937
HBJL	Na	12	19	15	10	12	14	13	13	13.500
	He	0.913*	0.961*	0.939	0.904	0.879	0.938*	0.895	0.930	0.920
	Ho	0.417	0.647	0.357	0.294	0.471	0.706	0.750	0.529	0.521
	PIC	0.947	0.933	0.937	0.890	0.927	0.928	0.968	0.972	0.939
HBWH	Na	12	19	16	12	15	13	19	18	15.500
	He	0.944	0.961*	0.956*	0.903	0.949*	0.924	0.966*	0.966*	0.946
	Ho	0.272	0.533	0.467	0.667	0.533	0.733	0.733	0.600	0.567
	PIC	0.991	0.896	0.922	0.917	0.958	0.921	0.970	0.927	0.938
HNHS	Na	16	21	15	16	17	8	20	18	16.375
	He	0.952*	0.974*	0.927	0.907*	0.952*	0.798	0.962*	0.956*	0.929
	Ho	0.250	0.750	0.438	0.813	0.733	0.750	0.500	0.688	0.615
	PIC	0.956	0.973	0.974	0.932	0.941	0.931	0.952	0.938	0.950
HNNX	Na	7	10	7	6	9	9	12	10	8.750
	He	0.801	0.913	0.853	0.844*	0.887	0.810	0.942*	0.892	0.868
	Ho	0.091	0.818	0.200	0.364	0.636	0.545	0.500	0.909	0.508
	PIC	0.936	0.976	0.926	0.927	0.956	0.912	0.951	0.936	0.941
JSYZ	Na	7	18	10	12	13	10	12	13	11.875
	He	0.909*	0.961*	0.806	0.924*	0.926	0.905*	0.915	0.937	0.910
	Ho	0.333	0.733	0.385	0.667	0.500	0.500	0.143	0.571	0.479
	PIC	0.897	0.918	0.973	0.899	0.973	0.948	0.940	0.918	0.933
JSYZJZ	Na	6	21	8	13	16	11	18	17	13.750
	He	0.817	0.954*	0.859	0.894	0.910	0.889*	0.943*	0.938	0.901
	Ho	0.111	0.722	0.412	0.611	0.500	0.611	0.500	0.611	0.510
	PIC	0.949	0.972	0.936	0.879	0.910	0.980	0.938	0.938	0.938
JXDC	Na	7	21	7	11	16	10	12	14	12.250
	He	0.890	0.968*	0.800	0.890	0.945*	0.761	0.908	0.922	0.886
	Ho	0.143	0.733	0.385	0.467	0.867	0.533	0.133	0.667	0.491
	PIC	0.982	0.936	0.926	0.919	0.928	0.979	0.914	0.935	0.943
JXJJ	Na	5	14	8	9	11	7	11	16	10.125
	He	0.803	0.957*	0.902	0.887	0.931	0.481	0.950*	0.957*	0.859
	Ho	0.167	0.545	0.667	0.636	0.727	0.455	0.500	0.818	0.564
	PIC	0.968	0.973	0.927	0.898	0.918	0.977	0.927	0.963	0.947
JXNC	Na	6	17	9	8	9	7	7	12	9.375
	He	0.911*	0.993*	0.908*	0.869*	0.915	0.824	0.856	0.948	0.903
	Ho	0.200	0.889	0.500	0.333	0.444	0.778	0.111	0.667	0.490
	PIC	0.953	0.911	0.890	0.915	0.937	0.967	0.917	0.967	0.932
ZJJH	Na	3	14	1	7	16	0	12	6	7.375
	He	0.800	0.940*	0.000	0.764	0.948*	0.000	0.915	0.720	0.636
	Ho	0.000	0.625	-	0.563	0.813	-	0.500	0.438	0.490
	PIC	0.946	0.927	0.917	0.908	0.918	0.952	0.978	0.962	0.939

- Relevant data unavailable
*Statistically significant deviation from Hardy-Weinberg equilibrium (P < 0.01)

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ISSN: 1756-3305

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