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Table 1 Polymerase chain reaction details for the qPCR/PCR assays used in the study for the testing of infectious agents

From: Prevalence study and risk factor analysis of selected bacterial, protozoal and viral, including vector-borne, pathogens in cats from Cyprus

Target species (target gene)

PCR primer or probe sequences (5'–3')

Product size (bp)

Reference

Bartonella henselae (alr-gcvP intergenic spacer)

F: GAGGGAAATGACTCTCTCAGTAAAA

110

[20]a

R: TGAACAGGATGTGGAAGAAGG

FAM-CAGCCAAATATACGGGCTATCCATCAA-TAMRA

“Candidatus Mycoplasma haemominutum” (16S rRNA gene)

F: TGATCTATTGTKAAAGGCACTTGCT

135

[18]

R: TTAGCCTCYGGTGTTCCTCAA

FAM-TTCAATGTGTAGCGGTGGAATGCGT-BHQ1

“Candidatus Mycoplasma turicensis” (16S rRNA gene)

F: AGAGGCGAAGGCGAAAACT

138

[18]

R: ACGTAAGCTACAACGCCGAAA

FAM-CGTAAACGATGGGTATTAGATGTCGGGAT-BHQ1

Ehrlichia/Anaplasma spp. (16S rRNA gene)

F: GGTACCYACAGAAGAAGTCC

345

[21]

R: TAGCACTCATCGTTTACAGC

Hepatozoon. spp. (18S rRNA gene)

F: AAACGGCTACCACATNTAAGGA

522

 

R: AATACAAATGCCCCCAACTNT

Leishmania spp. (screening assay) (kinetoplast DNA, kDNA)

F: CGGGTAGGGGCGTTCTG

115

[19]

R: ATTTTACACCAACCCCCAGTT

FAM-TGGGTGCAGAAATCCCGTTCA-BHQ1

Leishmania spp. (confirmatory assay) (kDNA)

F: CCTATTTTACACCAACCCCCAGT

120

[22, 23]

R: GGGTAGGGGCGTTCTGCGAAA

Mycoplasma haemofelis (16S rRNA gene)

F: GTGCTACAATGGCGAACACA

80

[18]

R: TCCTATCCGAACTGAGACGAA

FAM-TGTGTTGCAAACCAGCGATGGT-BHQ1

  1. Abbreviations: F forward primer sequence, R reverse primer sequence, FAM 6-carboxyfluorescein on the Taqman probe, BHQ1 black hole quencher 1 on the Taqman probe, TAMRA Carboxytetramethylrhodamine on the Taqman probe
  2. aThe reverse and probe sequences in the original paper are incorrectly labelled; the correct sequences are cited in this table