Table 6 Complete sequencing results for the six loci and ambiguity occurrences. Those cattle for whom all six loci sequences were obtained are in bold. The strain clustering within the two major groups, based on the concatenation of five (all but msp4) or six loci, is indicated in the last column

 BV2802 (Bull)

2014/10/09

2011/11/27

OK

OK

OK

OK

OK

OK

A

 BV2802 (Bull)

2016/03/04

OK

OK

OK

OK

OK

OK

B

 BV9949

2016/03/04

2014/03/12

OK

OK

OK

OK

OK

OK

A

 BV9949

2016/05/17

1 AS

OK

OK

OK

OK

OK

 BV0001

2016/03/04

2015/04/05

1 AS

OK

6 AS

OK

OK

2 AS

 BV0001

2016/05/17

3 AS

OK

9 AS

19 AS

OK

1 AS

 BV0006

2016/03/04

2015/04/27

1 AS

OK

OK

OK

OK

OK

 BV0006

2016/05/17

OK

OK

9 AS

OK

OK

2 AS

 BV0016

2016/03/04

2015/11/14

OK

na

4 AS

OK

OK

na

 BV0016

2016/05/17

OK

OK

OK

OK

na

2 AS

 BV0012

2016/10/25

2015/07/09

OK

OK

OK

OK

OK

OK

B

 BV0012

2017/05/16

OK

OK

OK

OK

OK

OK

A

 BV0047

2016/10/25

2016/08/29

OK

OK

OK

OK

OK

OK

A

 BV0047

2017/05/16

OK

OK

OK

OK

OK

OK

A

 BV0048

2016/10/25

2016/08/31

OK

OK

OK

OK

OK

OK

A

 BV0048

2017/05/16

OK

OK

OK

OK

OK

OK

B

 BV1551

2014/10/09

2003/01/02

OK

OK

OK

OK

OK

OK

B

 BV9932

2014/10/09

2013/05/03

OK

OK

OK

OK

OK

OK

A

 BV9940

2014/10/09

2013/05/16 (dead 2015/02/23)

2 AS

OK

3 AS

19 AS

na

OK

 BV9942

2014/10/09

2013/05/27

OK

OK

OK

OK

na

OK

 BV9952

2014/10/09

2014/04/13

3 AS

OK

5 AS

OK

na

OK

 BV9873

2014/10/09

2012/03/11 (dead 2016/06/09)

OK

OK

2 AS

na

na

na

 BV9959

2016/03/04

2014/05/05

OK

na

OK

na

OK

OK

 BV2193

2016/05/17

na

OK

OK

OK

OK

OK

OK

A

 BV2302

2016/05/17

na

OK

OK

OK

OK

OK

OK

B

 BV3559

2016/05/17

na

OK

OK

OK

OK

OK

OK

A

 BV0013

2016/05/17

2015/07/09

1 AS

OK

10 AS

OK

2 AS

1 AS

 BV9955

2016/05/17

2014/04/15

OK

OK

OK

OK

OK

OK

B

 BV0027

2017/05/16

2016/04/13

5 AS

OK

OK

OK

OK

OK

 BV0049

2017/05/16

2016/10/05

5 AS

OK

OK

19 AS

1 AS

2 AS

 BV0056

2017/05/16

2016/11/23

OK

na

OK

OK

OK

OK

 BV46

2011/05/22

2008/08/27

OK

OK

na

OK

OK

OK

A

 BV46

2011/08/21

OK

OK

OK

OK

OK

OK

A

 BV58

2011/05/17

2008/08/18

OK

OK

na

OK

OK

OK

A

 BV58

2011/07/09

OK

OK

OK

OK

OK

na

A

 BV61

2011/06/22

2008/10/15

OK

OK

na

OK

OK

OK

A

 BV61

2011/07/09

OK

OK

na

OK

OK

OK

A

 BV49

2011/05/19

2008/03/12

OK

OK

OK

OK

OK

OK

A

 BV34

2010/10/17

2007/10/14

OK

OK

OK

OK

OK

OK

A

 BV57

2011/06/04

2007/11/27

OK

OK

OK

OK

OK

OK

A