Primer name | Primer sequence (5′ → 3′) | Positions on the H-strand | Size of PCR product (bp) |
---|---|---|---|
F1 | TTTGTAAAGATGCCAGAAAA | 244–266 | 2110 |
R1 | AYCTAGATCATTTTTTTGGA | 2337–2356 | |
F2 | GCCCCATATATGTATAGTAT | 2225–2244 | 1962 |
R2 | TATACACCGAAGAATAGCAT | 3897–3916 | |
F3 | GATTTRGTGTATTTTCATTCRTA | 3710–3732 | 2508 |
R3 | CCAAAACACCCTAACCTAATAT | 6196–6217 | |
F4 | ATCGTTTGCCWTATTGTTATAG | 5965–5986 | 2622 |
R4 | TAACGGAAAATAAATTCACA | 8567–8586 | |
F5 | TGCTGTTAACTTCAAGAAATGG | 8418–8439 | 1885 |
R5 | ACATAACATAATGAAAATGAGC | 10,281–10,302 | |
F6 | ATATGTTTACTGTTGGGTTRGAT | 10,027–10,049 | 2352 |
R6 | GCAGCACATAGACTTGGCTT | 12,360–12,379 | |
F7 | CATCTGCGGTTARTCTGTTTTC | 12,036–12,057 | 2143 |
R7 | TAATGCTTAAAACTAACTCATA | 437–458 | |
F8 | TTTATTTTTGTGTCGGTGTTTG | 13,448–13,469 | 1387 |
R8 | CCCGCATAGCCTCCAACAA | 1096–1114 | |
F9 | TTCTGGTGTTAAGTGTTGTG | 13,659–13,678 | 498 |
R9 | TAACTTCTGACATAGCTACC | 417–436 | |
F10 | GGCTTGTGTGTATTATTTGG | 13,514–13,533 | 793 |
R10 | ACAAACCTATACTAACACAC | 567–586 | |
F11 | GGTGTTAAGTGTTGTGGCCAGAAA | 13,663–13,686 | 530 |
R11 | GAAACATCCATAATTAATGCTTAAAACTAACTC | 440–472 |