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Table 3 Significantly enriched functions in the host cell transcriptome based on the analysis of 100 S. scrofa genes with the highest FPKM values

From: Transcriptome analysis of pig intestinal cell monolayers infected with Cryptosporidium parvum asexual stages

Category Term Gene count Fold enrich. Bonferronia Benjaminia FDRa
UP_KEYWORDS Ribosomal protein 38 79.30634 9.3879E-62 9.3879E-62 8.3E-61
UP_KEYWORDS Ribonucleoprotein 38 65.58024 6.2878E-58 3.1439E-58 5.56E-57
KEGG_PATHWAY ssc03010: Ribosome 41 28.99698 5.0057E-50 5.0057E-50 6.79E-49
GOTERM_MF_DIRECT GO:0003735~structural constituent of ribosome 41 29.07368 4.3664E-48 4.3664E-48 4.59E-47
GOTERM_BP_DIRECT GO:0006412~translation 34 27.72683 2.8412E-37 2.8412E-37 1.1E-36
UP_KEYWORDS Acetylation 37 18.14443 3.5317E-34 1.1772E-34 3.12E-33
GOTERM_CC_DIRECT GO:0022627~cytosolic small ribosomal subunit 18 71.36052 3.98E-26 3.98E-26 4.28E-25
GOTERM_CC_DIRECT GO:0022625~cytosolic large ribosomal subunit 19 53.41227 5.2961E-25 2.648E-25 5.69E-24
UP_KEYWORDS Phosphoprotein 33 9.461551 5.8773E-21 1.4693E-21 5.2E-20
GOTERM_CC_DIRECT GO:0070062~extracellular exosome 43 4.181397 1.2331E-15 4.1104E-16 1.33E-14
GOTERM_CC_DIRECT GO:0005925~focal adhesion 21 13.99527 1.3908E-15 3.477E-16 1.5E-14
GOTERM_CC_DIRECT GO:0005840~ribosome 13 45.68154 3.6801E-15 7.3603E-16 3.96E-14
UP_KEYWORDS Ubl conjugation 17 19.18998 4.3965E-14 8.7708E-15 3.89E-13
UP_KEYWORDS Isopeptide bond 15 24.92816 8.793E-14 1.4655E-14 7.77E-13
GOTERM_MF_DIRECT GO:0044822~poly(A) RNA binding 26 5.315667 3.7013E-10 1.8506E-10 3.89E-09
UP_KEYWORDS Cytoplasm 21 7.332953 4.9698E-10 7.0997E-11 4.4E-09
GOTERM_CC_DIRECT GO:0016020~membrane 24 5.248581 4.9125E-09 8.1875E-10 5.28E-08
GOTERM_BP_DIRECT GO:0002181~cytoplasmic translation 7 40.70384 4.3892E-06 2.1946E-06 1.7E-05
GOTERM_CC_DIRECT GO:0015935~small ribosomal subunit 4 123.6916 0.0002591 3.7018E-05 0.002786
GOTERM_BP_DIRECT GO:0000028~ribosomal small subunit assembly 5 47.76471 0.0009287 0.00030966 0.003596
GOTERM_BP_DIRECT GO:0000027~ribosomal large subunit assembly 5 39.33564 0.00216972 0.00054287 0.008406
GOTERM_MF_DIRECT GO:0003729~mRNA binding 7 13.09892 0.00146297 0.0004879 0.015379
GOTERM_MF_DIRECT GO:0098641~cadherin binding involved in cell-cell adhesion 4 67.36585 0.00221329 0.00055378 0.023274
UP_KEYWORDS Glycoprotein 12 5.067748 0.00274581 0.00034364 0.024321
GOTERM_CC_DIRECT GO:0031012~extracellular matrix 7 12.02557 0.00238484 0.00029842 0.025667
  1. aSignificant values are italicized