Primer name
|
Primer sequence (5′-3′)
|
Amplicon size (bp)
|
GenBank ID
|
Reference
|
---|
T. bryosalmonae RPL18 F
|
GTAAACGGGGACAAAAAGA
|
251
|
FR852769
|
[8]
|
T. bryosalmonae RPL18 R
|
GGAGCAGCACCAAAATAC
|
Myx18-909 F
|
CTTTGACTGAATGTTATTCAGTTACAGCA
|
88
|
AF115253
|
[39]
|
Myx18-996 R
|
GCGGTCTGGGCAAATGC
|
SOCS-1 F
|
GATTAATACCGCTGGGATTCTGTG
|
136
|
AM748721
|
[8]
|
SOCS-1 R
|
CTCTCCCATCGCTACACAGTTCC
|
SOCS-3 F
|
CACAGAGAAACCGTTAAAAGGACTATCC
|
228
|
AM748723
|
[8]
|
SOCS-3 R
|
AAGGGGCTGCTGCTCATGAC
|
JAK-1 F
|
ACACTGATATTGGGCCGTTCTGGA
|
174
|
CA378782
|
[40]
|
JAK-1 R
|
CCTCGTCCTCTGCATCTTTACCAAC
|
STAT-3 F
|
GAATGAAGGGTATATTCTGG
|
152
|
U60333
|
[41]
|
STAT-3 R
|
TCCCACTGATGTCCTTTTCC
|
EF-1α F
|
AGACAGCAAAAACGACCCCC
|
167
|
HF563594
|
[42]
|
EF-1α R
|
AACGACGGTCGATCTTCTCC
|
- These primers were used in RT-qPCR to quantify the relative gene expression in posterior kidneys and cranial cartilages of infected rainbow trout during single and co-infections