Table 1 De novo transcriptome assembly summary statistics for adult C. daubneyi specimens collected from a natural bovine infection following RNAseq and Trinity assembly
Category | Statistic |
|---|---|
Total raw reads | 226,188,786 |
Per replicate | |
 A | 95,417,496 |
 B | 74,644,572 |
 C | 56,126,718 |
GC percentage | 47 |
Total assembled contigs generated | 103,541 |
Contigs mapped to raw reads | 73,792 |
Average contig length (bp) (mapped) | 738 (892) |
Maximum contig length (bp) | 24,404 |
Minimum contig length (bp) | 224 |
% mapped contigs without BLASTx/p annotation | 62.94/62.74 |
% Mapped contigs with Signal Peptide (SigP) | 1.80 |
% Mapped contigs with Transmembrane Domain (TM) | 5.77 |
% Mapped contigs with both TM+SigP | 0.65 |
Unique gene components identified (from mapped contigs) | 54,617 |
% gene components without BLASTx/p annotation | 69.51 |