Genotype/species | Country (no. of positive samples) | Highest sequence similarity in GenBank shown as gene: bp/bp (%) | Closest match sequence accession number | Accession number (this study) | Reference |
---|---|---|---|---|---|
Rickettsia helvetica | China (1) | – | – | – | – |
Rickettsia sp. Av22 | Hungary (4) | gltA: 757/757 (100) | JN038177 | MH383138 | Socolovschi et al. [5] |
17 kDa: 394/394 (100) | several | MH383143 | – | ||
OmpA: 477/477 (100) | several | MH383147 | – | ||
Rickettsia africae-like | Hungary (1) | gltA: 757/757 (100) | CP001612 | MH383139 | Sekeyová et al. [12] |
17 kDa: 394/394 (100) | several | MH383144 | – | ||
OmpA: 475/477 (99.6) | CP001612 | MH383148 | Sekeyová et al. [12] | ||
Rickettsia hoogstraalii | South Africa (1) | gltA: 757/757 (100) | FJ767737 | MH383140 | Duh et al. [17] |
17 kDa: 390/390 (100)a | FJ767736 | MH383145 | Duh et al. [17] | ||
Rickettsia lusitaniae | Mexico (1) | gltA: 757/757 (100)b | JQ771933 | MH383141 | Milhano et al. [18] |
China (2) | gltA: 756/757 (99.9) | JQ771933 | MH383142 | Milhano et al. [18] | |
17 kDa: 393/394 (99.7) | JQ771934 | MH383146 | Milhano et al. [18] | ||
OmpA: 461/464 (99.4) | JQ771935 | MH383149 | Milhano et al. [18] | ||
Anaplasma phagocytophilum | Hungary (1) | – | – | – | – |
Romania (1) | – | – | – | – | |
Bartonella sp. Ia23 | Hungary (1) | gltA: 313/317 (98.7) | KX300154 | MH544201 | Urushadze et al. [20] |
ITS: 520/529 (98.3)c | MF288126 | MH544202 | McKee et al. [21] | ||
Bartonella sp. Iv76 | Romania (1) | gltA: 317/317 (100) | KR822802 | MH578453 | Lilley et al. [22] |
ITS: 291/306 (95.1) | MF288124 | MH544203 | McKee et al. [21] | ||
Mycoplasma sp. Is128-1 | Hungary (1) | 16S rRNA: 953/954 (99.9) | KM538692 | MH383150 | Millán et al. [23] |
Mycoplasma sp. Is128-2 | Hungary (1) | 16S rRNA: 824/826 (99.8) | KM538698 | MH383151 | Millán et al. [23] |
Mycoplasma sp. Is128-3 | Hungary (1) | 16S rRNA: 952/954 (99.8) | KM538692 | MH383152 | Millán et al. [23] |