Table 2 I-TASSER structure/function predictions of T. circumcincta ES hypothetical proteins. Spot numbers refer to those in Fig. 1. 3D structural models of T. circumcincta hypothetical proteins were generated by I-TASSER [22] and compared to Protein Bata Bank (PDB) proteins. Template modelling score (TM-score) shows the structural similarity between the I-TASSER predicted protein structure model and PDB protein. TM-score = 1 indicates a perfect match between two structures; TM-score > 0.5 indicates a model of correct topology
Spot | NCBI protein ID | Protein accession | Protein Data Bank (PDB) top hit [PDB ID]; protein description | TM-score | Reference |
|---|---|---|---|---|---|
1 | Hypothetical protein TELCIR_08116 | PIO70037 | [3NT8]; Necator americanus ASP-1 (Na-ASP-1) | 0.874 | [23] |
ShK domain protein | PIO55996 | [4GWM]; Human promeprin beta | 0.902 | [24] | |
6 | Hypothetical protein TELCIR_10830 | PIO67421 | [3NT8]; Necator americanus ASP-1 (Na-ASP-1) | 0.873 | [23] |
15 and 16 | Hypothetical protein TELCIR_00024 | PIO77845 | [3NT8]; Necator americanus ASP-1 (Na-ASP-1) | 0.643 | [23] |