Table 3 SNPs of the ITS regions of 18S rRNA gene of P. hominis identified in the present study
From: High prevalence of Pentatrichomonas hominis infection in gastrointestinal cancer patients
Group | GenBank ID | Reference sequence | Isolate no. | Type | SNP |
|---|---|---|---|---|---|
Control | MK177542 | KJ404269 | 10 | CCH1 | – |
MK177543 | KJ404269 | 1 | CCH2 | A317C | |
MK177544 | KJ404269 | 1 | CCH3 | A275G | |
MK177545 | KJ404269 | 1 | CCH4 | 331–332 T insert | |
Gastrointestinal cancer | MK177542 | KJ404269 | 71 | CCH1 | – |
MK177546 | KJ404269 | 1 | CCH5 | T30G; T31C; A33G; A35T; 43 A missing; 54 A missing; 317 A missing | |
MK177547 | KJ404269 | 2 | CCH6 | 189 T missing; T274A | |
MK177548 | KJ404269 | 2 | CCH7 | G131A | |
MK177549 | KJ404269 | 1 | CCH8 | A127 G | |
MK177550 | KJ404269 | 1 | CCH9 | T142A | |
MK177551 | KJ404269 | 1 | CCH10 | A156G | |
MK177552 | KJ404269 | 1 | CCH11 | 189 T missing; 317 A missing | |
MK177545 | KJ404269 | 1 | CCH4 | 331–332 T insert |