Skip to main content

Table 2 Distribution of the differentially expressed genes in immune related pathways categorized from the KEGG pathway database

From: Transcriptome profiling of posterior kidney of brown trout, Salmo trutta, during proliferative kidney disease

Sl No

Pathway ID

Pathway

No. of genes

1

ko04062

Chemokine signaling

12

2

ko04621

NOD-like receptor signaling

10

3

ko04650

Natural killer cell mediated cytotoxicity

9

4

ko04620

Toll-like receptor signaling

9

5

ko04625

C-type lectin receptor signaling

9

6

ko04659

Th17 cell differentiation

8

7

ko04640

Hematopoietic cell lineage

8

8

ko04662

B cell receptor signaling

7

9

ko04670

Leukocyte transendothelial migration

6

10

ko04658

Th1 and Th2 cell differentiation

6

11

ko04610

Complement and coagulation cascades

6

12

ko04672

Intestinal immune network for IgA production

5

13

ko04660

T cell receptor signaling

5

14

ko04666

Fc gamma R-mediated phagocytosis

5

15

ko04622

RIG-I-like receptor signaling

4

16

ko04657

IL-17 signaling

4

17

ko04611

Platelet activation

4

18

ko04612

Antigen processing and presentation

3

19

ko04623

Cytosolic DNA-sensing

3

20

ko04624

Toll and Imd signaling

2

21

ko04664

Fc epsilon RI signaling

2

  1. Notes: The pathway analysis mapped 571 out of 1169 DEGs (48.8%) to 282 pathways, including 21 immune system pathways in the KEGG database