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Table 2 Degree of concordance between cytological karyotype and individual PCR-RFLP genotyping assay

From: Highly specific PCR-RFLP assays for karyotyping the widespread 2Rb inversion in malaria vectors of the Anopheles gambiae complex

CountryDraIII concordance (%)MspAI concordance (%)TatI concordance (%)
An. coluzziiAn. gambiaeAn. coluzziiAn. gambiaeAn. coluzziiAn. gambiae
Benin19/19 (100)na19/19 (100)na15/19 (78.9)na
Burkina Fasona19/20 (95.0)na14/20 (70)na17/20 (85)
Burkina Faso (lab)25/25 (100)na26/27 (96.3)na16/24 (66.6)na
Cameroon10/10 (100)263/276 (95.2)10/10 (100)208/274 (75.9)10/10 (100)253/275 (92)
Gambia + Senegala6/6 (100)56/58 (96.6)5/6 (83.3)52/56 (92.9)4/6 (66.7)47/47 (100)
Guinea Bissau3/3 (100)18/18 (100)3/3 (100)16/16 (100)3/3 (100)16/16 (100)
Mali201/211 (95.3)55/57 (96.5)128/131 (97.7)22/26 (84.6)104/132 (78.8)21/28 (75)
Tanzania + DRCana11/13 (84.6)na13/13 (100)na13/13 (100)
Total264/274 (96.4)422/443 (95.3)191/196 (97.4)325/405 (80.2)152/194 (78.3)367/399 (92.0)
  1. aSpecimens were combined into one sample due to geographical proximity and small sample size
  2. Abbreviations: DRC, Democratic Republic of Congo; na, not available