Table 6 The msp1α microsatellite sequence analysis in Anaplasma marginale isolates from Egypt
Isolate | GenBank ID | Genotype | Structure of MSP1α tandem repeats | No. of repeats | m | N | SD-ATG distance |
|---|---|---|---|---|---|---|---|
EL-Minia-43 | MN257055 | Minia-1 | Eg21, Eg10, Eg11, Eg5 | 4 | 3 | 5 | 23 |
EL-Minia-44 | MN257056 | Minia-2 | Eg10, Eg12, Eg13, Eg10 | 4 | 2 | 7 | 23 |
EL-Minia-45 | MN257057 | Minia-3 | Eg14, Eg15, Eg16, Eg16, Eg16, Eg6 | 6 | 2 | 7 | 23 |
Assiut-59 | MN273312 | Assiut-1 | Eg10, Eg11, Eg5 | 3 | 3 | 5 | 23 |
Assiut-105 | MN385280 | NV-1 | Eg17, Eg23, Eg23, Eg23, Eg24 | 5 | 3 | 5 | 23 |
Assiut-214 | MN273313 | Assiut-2 | Eg11, Eg11, Eg22, Eg22, Eg14 | 5 | 3 | 5 | 23 |
Assiut-Buffalo268 | MN 311243 | Assiut-3 | Eg8, Eg1, Eg1, Eg2 | 4 | 3 | 5 | 23 |
Assiut-Buffalo269 | MN311244 | Assiut-4 | Eg8, Eg3, Eg8, Eg4 | 4 | 3 | 5 | 23 |
EL-Fayoum-33 | MN273314 | Fayoum-1 | Eg7, F, F, F | 4 | 3 | 5 | 23 |
EL-Fayoum-185 | MN385279 | Fayoum-2 | Eg3, Eg1, Eg3, Eg3 | 4 | 3 | 5 | 23 |
EL-Fayoum-Buffalo 288 | MN 311245 | Fayoum-3 | Eg8, Eg5, Eg8, Eg20 | 4 | 3 | 5 | 23 |
EL-Fayoum-Buffalo 291 | MN 311246 | Fayoum-4 | Eg8, Eg5, Eg8, Eg9 | 4 | 3 | 5 | 23 |
New Valley-136 | MN370074 | NV-1 | Eg17, Eg23, Eg23, Eg23, Eg24 | 5 | 3 | 5 | 23 |
New Valley-311 | MN370075 | NV-1 | Eg17, Eg23, Eg23, Eg23, Eg24 | 5 | 3 | 5 | 23 |
New Valley-133 | MN370072 | NV-1 | Eg17, Eg23, Eg23, Eg23, Eg24 | 5 | 4 | 5 | 27 |
New Valley-134 | MN370073 | NV-1 | Eg17, Eg23, Eg23, Eg23, Eg24 | 5 | 4 | 5 | 27 |
New Valley-2 | MN370077 | NV-2 | τ, Eg19, Eg3, Eg25 | 4 | 3 | 7 | 27 |
New Valley-337 | MN370071 | NV-3 | Eg17, Eg23, Eg18 | 3 | 3 | 7 | 27 |
New Valley-370 | MN370076 | NV-4 | Eg23, Eg23, Eg23, Eg18 | 4 | 4 | 5 | 27 |